RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SSRP1Q08945 709 aaKnown RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 RASGRP4Q8TDF6 673 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 LINC01599Q8WXQ3 324 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 PLVAPQ9BX97 442 aa16.7■□□□□ 0.26
CBX3-203ENST00000409747 NSUN3Q9H649 340 aaKnown RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 MYH9P35579 1960 aaKnown RBP16.7■□□□□ 0.26
CBX3-203ENST00000409747 LOXHD1Q8IVV2 1947 aa16.69■□□□□ 0.26
CBX3-203ENST00000409747 WDR64B1ANS9 1081 aa16.69■□□□□ 0.26
CBX3-203ENST00000409747 ADAMTS3O15072 1205 aa16.69■□□□□ 0.26
CBX3-203ENST00000409747 USP11P51784 963 aa16.69■□□□□ 0.26
CBX3-203ENST00000409747 LEXMQ3ZCV2 418 aa16.69■□□□□ 0.26
CBX3-203ENST00000409747 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
CBX3-203ENST00000409747 ZNF274Q96GC6 653 aaPredicted RBP16.69■□□□□ 0.26
CBX3-203ENST00000409747 PPFIA3O75145 1194 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 RPS6KA5O75582 802 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 DEXIO95424 95 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 KCNA5P22460 613 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 PUS10Q3MIT2 529 aaKnown RBP16.68■□□□□ 0.26
CBX3-203ENST00000409747 KIAA0319LQ8IZA0 1049 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 LENG9Q96B70 501 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 UIMC1Q96RL1 719 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 LRFN2Q9ULH4 789 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 GINS2Q9Y248 185 aa16.68■□□□□ 0.26
CBX3-203ENST00000409747 ZBTB42B2RXF5 422 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 GPR182O15218 404 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 MAGEB2O15479 319 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 NCK2O43639 380 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 C22orf31O95567 290 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 LINC00271P0C7V0 271 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 ATP4AP20648 1035 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 SFNP31947 248 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 NFX1Q12986 1120 aaKnown RBP16.67■□□□□ 0.26
CBX3-203ENST00000409747 GALNT17Q6IS24 598 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 ZNF710Q8N1W2 664 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 RIT2Q99578 217 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 C1QTNF1Q9BXJ1 281 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 PCDHA4Q9UN74 947 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 GAS7O60861 476 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 SARSP49591 514 aaKnown RBP16.67■□□□□ 0.26
CBX3-203ENST00000409747 JAK3P52333 1124 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 CRYBB1P53674 252 aaPredicted RBP16.67■□□□□ 0.26
CBX3-203ENST00000409747 NAALADL2Q58DX5 795 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 TCEAL5Q5H9L2 206 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 RTN4RL1Q86UN2 441 aaPredicted RBP16.67■□□□□ 0.26
CBX3-203ENST00000409747 CRIPAKQ8N1N5 446 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 METTL13Q8N6R0 699 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 P2RX5Q93086 422 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 PABPC5Q96DU9 382 aaKnown RBP16.67■□□□□ 0.26
CBX3-203ENST00000409747 ERVK-5Q9HDB9 667 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 C1orf112Q9NSG2 853 aa16.67■□□□□ 0.26
CBX3-203ENST00000409747 DENND3A2RUS2 1198 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 MSH4O15457 936 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 CDKL5O76039 1030 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 TMOD1P28289 359 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 LRCH2Q5VUJ6 765 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 TBCKQ8TEA7 893 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 MAP7D2Q96T17 732 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 TEKT3Q9BXF9 490 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 UPF3BQ9BZI7 483 aaKnown RBP16.66■□□□□ 0.26
CBX3-203ENST00000409747 TMX1Q9H3N1 280 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 DISC1Q9NRI5 854 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 FAM50BQ9Y247 325 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 NOC2LQ9Y3T9 749 aaKnown RBP16.66■□□□□ 0.26
CBX3-203ENST00000409747 PCDHB7Q9Y5E2 793 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 BRWD1Q9NSI6 2320 aa16.66■□□□□ 0.26
CBX3-203ENST00000409747 MMP1P03956 469 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 OATP04181 439 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 BLIDQ8IZY5 108 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 RDM1Q8NG50 284 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 SLC5A5Q92911 643 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 NRBP2Q9NSY0 501 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 MRPL42Q9Y6G3 142 aaKnown RBP16.65■□□□□ 0.26
CBX3-203ENST00000409747 EVPLQ92817 2033 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 GRM6O15303 877 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 COL19A1Q14993 1142 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 KIZQ2M2Z5 673 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 Q4G0T1 1027 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 PTCRAQ6ISU1 281 aaPredicted RBP16.65■□□□□ 0.26
CBX3-203ENST00000409747 SLC24A5Q71RS6 500 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
CBX3-203ENST00000409747 NEK9Q8TD19 979 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 PPP2R3CQ969Q6 453 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 OSMRQ99650 979 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 RGS18Q9NS28 235 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 ST3GAL5Q9UNP4 418 aa16.65■□□□□ 0.26
CBX3-203ENST00000409747 WDR81Q562E7 1941 aa16.64■□□□□ 0.26
CBX3-203ENST00000409747 KIAA1671Q9BY89 1806 aa16.64■□□□□ 0.25
CBX3-203ENST00000409747 CHMP2AO43633 222 aa16.64■□□□□ 0.25
CBX3-203ENST00000409747 PRKCEQ02156 737 aa16.64■□□□□ 0.25
CBX3-203ENST00000409747 STK3Q13188 491 aa16.64■□□□□ 0.25
CBX3-203ENST00000409747 PAN2Q504Q3 1202 aaKnown RBP16.64■□□□□ 0.25
CBX3-203ENST00000409747 MOXD1Q6UVY6 613 aa16.64■□□□□ 0.25
CBX3-203ENST00000409747 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.64■□□□□ 0.25
CBX3-203ENST00000409747 TMEM40Q8WWA1 233 aa16.64■□□□□ 0.25
CBX3-203ENST00000409747 ADAM2Q99965 735 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms