RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ATG7O95352 703 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 GCNT3O95395 438 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 MYBP10242 640 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 CYP2B6P20813 491 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 CCNE1P24864 410 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 PTPN21Q16825 1174 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 PRAMEF19Q5SWL8 479 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 OTUD6AQ7L8S5 288 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
CHMP3-204ENST00000409727 CSGALNACT2Q8N6G5 542 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 SEPT1Q8WYJ6 367 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 TRIM44Q96DX7 344 aaPredicted RBP13.79□□□□□ -0.2
CHMP3-204ENST00000409727 PARVGQ9HBI0 331 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 VTA1Q9NP79 307 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 GPRC5CQ9NQ84 441 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 CREBZFQ9NS37 354 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 ANKEF1Q9NU02 776 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 IGSF9BQ9UPX0 1349 aa13.79□□□□□ -0.2
CHMP3-204ENST00000409727 BICDL2A1A5D9 508 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 STBD1O95210 358 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 ATP4AP20648 1035 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 MARK3P27448 753 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 CTGFP29279 349 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 NMT1P30419 496 aaKnown RBP13.78□□□□□ -0.2
CHMP3-204ENST00000409727 PPP1R2P41236 205 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 APLP1P51693 650 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 UBASH3AP57075 661 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 HTRA3P83110 453 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 CCL14Q16627 93 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 MTERF2Q49AM1 385 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 MAMDC4Q6UXC1 1216 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 TRIM50Q86XT4 487 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 SCFD1Q8WVM8 642 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 GLG1Q92896 1179 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 NAP1L5Q96NT1 182 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-204ENST00000409727 PCYT2Q99447 389 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 GPR20Q99678 358 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 DUSP9Q99956 384 aaKnown RBP13.78□□□□□ -0.2
CHMP3-204ENST00000409727 SRRTQ9BXP5 876 aaKnown RBP13.78□□□□□ -0.2
CHMP3-204ENST00000409727 ARHGAP39Q9C0H5 1083 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
CHMP3-204ENST00000409727 RASSF10A6NK89 507 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
CHMP3-204ENST00000409727 TBC1D8O95759 1140 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 GAP43P17677 238 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 GUCY2CP25092 1073 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 STAT5BP51692 787 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 SOX10P56693 466 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 COBLL1Q53SF7 1204 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 FAM102BQ5T8I3 360 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 CDKAL1Q5VV42 579 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 DAW1Q8N136 415 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 AZI2Q9H6S1 392 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 ODF2LQ9ULJ1 636 aa13.78□□□□□ -0.2
CHMP3-204ENST00000409727 MAFBQ9Y5Q3 323 aaPredicted RBP13.78□□□□□ -0.2
CHMP3-204ENST00000409727 DOCK3Q8IZD9 2030 aa13.77□□□□□ -0.2
CHMP3-204ENST00000409727 WDR81Q562E7 1941 aa13.77□□□□□ -0.2
CHMP3-204ENST00000409727 LOXHD1Q8IVV2 1947 aa13.77□□□□□ -0.2
CHMP3-204ENST00000409727 IGKV6D-21A0A0A0MT36 114 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 KCNJ18B7U540 433 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 OATP04181 439 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 CYP2C19P33261 490 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 MAPK7Q13164 816 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 ACVR2BQ13705 512 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 KCNJ12Q14500 433 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 ZC2HC1CQ53FD0 456 aaPredicted RBP13.77□□□□□ -0.21
CHMP3-204ENST00000409727 XKR3Q5GH77 459 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 FAM160B1Q5W0V3 765 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 CENPPQ6IPU0 288 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 KSR1Q8IVT5 923 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 FAM178BQ8IXR5 827 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 MRFAP1L1Q96HT8 127 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 CYP26B1Q9NR63 512 aa13.77□□□□□ -0.21
CHMP3-204ENST00000409727 ALDH1A1P00352 501 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 RGS2P41220 211 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 ARHGAP1Q07960 439 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 KCNA1Q09470 495 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 TSG101Q99816 390 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 NRBP1Q9UHY1 535 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 ZNF236Q9UL36 1845 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 MYH9P35579 1960 aaKnown RBP13.76□□□□□ -0.21
CHMP3-204ENST00000409727 GH1P01241 217 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 SMPD1P17405 629 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 PSMC4P43686 418 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 ZNF131P52739 623 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 TCP11X2Q5H9J9 407 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 OLFML3Q9NRN5 406 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 TAB2Q9NYJ8 693 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 MAGEC2Q9UBF1 373 aaPredicted RBP13.76□□□□□ -0.21
CHMP3-204ENST00000409727 GJD2Q9UKL4 321 aa13.76□□□□□ -0.21
CHMP3-204ENST00000409727 K7ENM7 598 aa13.75□□□□□ -0.21
CHMP3-204ENST00000409727 CBFA2T2O43439 604 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms