RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ALPK3Q96L96 1907 aa18.56■□□□□ 0.56
SUMO1-208ENST00000409627 TMEM150BA6NC51 233 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 GOLGA6L4A6NEF3 574 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 ZBTB39O15060 712 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 EYA4O95677 639 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 RARRES1P49788 294 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 ATN1P54259 1190 aaPredicted RBP18.55■□□□□ 0.56
SUMO1-208ENST00000409627 ADAM17P78536 824 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 RRAGBQ5VZM2 374 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 KCNK18Q7Z418 384 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 PPP1R13LQ8WUF5 828 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 MRPS27Q92552 414 aaKnown RBP18.55■□□□□ 0.56
SUMO1-208ENST00000409627 CEP170P1Q96L14 293 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 CEP89Q96ST8 783 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 PYM1Q9BRP8 204 aaKnown RBP18.55■□□□□ 0.56
SUMO1-208ENST00000409627 CYP26B1Q9NR63 512 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 SETD4Q9NVD3 440 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 STK17AQ9UEE5 414 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 HPSEQ9Y251 543 aa18.55■□□□□ 0.56
SUMO1-208ENST00000409627 A0A087X0B3 334 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 MBLAC1A4D2B0 266 aaPredicted RBP18.54■□□□□ 0.56
SUMO1-208ENST00000409627 E9PMD0 336 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 PFKFB1P16118 471 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 NPEPPSP55786 919 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 HIC1Q14526 733 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 MTERF2Q49AM1 385 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 XKR9Q5GH70 373 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 GDF6Q6KF10 455 aaPredicted RBP18.54■□□□□ 0.56
SUMO1-208ENST00000409627 ANKRD33Q7Z3H0 272 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 FSIP1Q8NA03 581 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 LRRC15Q8TF66 581 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 CCDC43Q96MW1 224 aaKnown RBP18.54■□□□□ 0.56
SUMO1-208ENST00000409627 PLIN2Q99541 437 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 BLOC1S4Q9NUP1 217 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 KCNH3Q9ULD8 1083 aa18.54■□□□□ 0.56
SUMO1-208ENST00000409627 A0A087WWV3 80 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 A0A1B0GVL5 298 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 STAT6P42226 847 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 IGBP1P78318 339 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 E2F4Q16254 413 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 LRRC26Q2I0M4 334 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 MARCH8Q5T0T0 291 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 FAM126BQ8IXS8 530 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 PDILTQ8N807 584 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 TRAPPC12Q8WVT3 735 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 RAD54LQ92698 747 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 TOX2Q96NM4 488 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 SH2D3AQ9BRG2 576 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 BHMT2Q9H2M3 363 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 TUBE1Q9UJT0 475 aa18.53■□□□□ 0.56
SUMO1-208ENST00000409627 EVPLQ92817 2033 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 ARHGEF35A5YM69 484 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 GOLGA6L22H0YM25 854 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 MAGEB2O15479 319 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 PRPF40AO75400 957 aaKnown RBP18.52■□□□□ 0.56
SUMO1-208ENST00000409627 C22orf31O95567 290 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 RFC5P40937 340 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 RTP1P59025 263 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 UBE2HP62256 183 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 TBC1D8BQ0IIM8 1120 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 PTGISQ16647 500 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 TRIM60Q495X7 471 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 NAALADL2Q58DX5 795 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 MTHFD1LQ6UB35 978 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 EXOC8Q8IYI6 725 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 SYT2Q8N9I0 419 aaPredicted RBP18.52■□□□□ 0.56
SUMO1-208ENST00000409627 IQUBQ8NA54 791 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 LARP4BQ92615 738 aaKnown RBP18.52■□□□□ 0.56
SUMO1-208ENST00000409627 JPH2Q9BR39 696 aaPredicted RBP18.52■□□□□ 0.56
SUMO1-208ENST00000409627 PANK2Q9BZ23 570 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 CUEDC2Q9H467 287 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 GOLPH3LQ9H4A5 285 aa18.52■□□□□ 0.56
SUMO1-208ENST00000409627 DHX33Q9H6R0 707 aaKnown RBP18.52■□□□□ 0.56
SUMO1-208ENST00000409627 TLR3O15455 904 aaKnown RBP18.51■□□□□ 0.55
SUMO1-208ENST00000409627 POLR2DO15514 142 aaKnown RBP18.51■□□□□ 0.55
SUMO1-208ENST00000409627 TREHO43280 583 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 B4GALT4O60513 344 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 GADD45BO75293 160 aaPredicted RBP18.51■□□□□ 0.55
SUMO1-208ENST00000409627 MAFO75444 373 aaPredicted RBP18.51■□□□□ 0.55
SUMO1-208ENST00000409627 DGAT1O75907 488 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 CD4P01730 458 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 PLA2G4BP0C869 781 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 KLRC1P26715 233 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 NDUFA8P51970 172 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 ZNF200P98182 395 aaPredicted RBP18.51■□□□□ 0.55
SUMO1-208ENST00000409627 SLC7A3Q8WY07 619 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 DHX58Q96C10 678 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 CTAGE1Q96RT6 745 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 MAGEF1Q9HAY2 307 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 TRMT13Q9NUP7 481 aaKnown RBP18.51■□□□□ 0.55
SUMO1-208ENST00000409627 PCDHA2Q9Y5H9 948 aa18.51■□□□□ 0.55
SUMO1-208ENST00000409627 IGKV6-21A0A0C4DH24 114 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 DCDC2CA8MYV0 355 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 GAS2O43903 313 aaKnown RBP18.5■□□□□ 0.55
SUMO1-208ENST00000409627 PQBP1O60828 265 aaKnown RBP18.5■□□□□ 0.55
SUMO1-208ENST00000409627 SYKP43405 635 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 POLGP54098 1239 aaPredicted RBP18.5■□□□□ 0.55
SUMO1-208ENST00000409627 SLC12A3P55017 1021 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 TLE2Q04725 743 aa18.5■□□□□ 0.55
SUMO1-208ENST00000409627 PTK7Q13308 1070 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms