RNA–Protein interactions for RNA: ENST00000409212.5

SH3BP4-203, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3BP4, Length 5,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-203ENST00000409212 QARSP47897 775 aaKnown RBP17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 TNFAIP2Q03169 654 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 DNAAF3Q8N9W5 541 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 NSUN4Q96CB9 384 aaKnown RBP17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 CPSF3Q9UKF6 684 aaKnown RBP17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 MIF4GDA9UHW6 222 aaKnown RBP17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 SPP2Q13103 211 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 SH2D4BQ5SQS7 431 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 GUF1Q8N442 669 aaKnown RBP17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 DYDC2Q96IM9 177 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 GPC4O75487 556 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 BASP1P80723 227 aaKnown RBP17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 ZNF710Q8N1W2 664 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 TMEM260Q9NX78 707 aa17.12■□□□□ 0.33
SH3BP4-203ENST00000409212 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 POTECB2RU33 542 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 DYNLT1P63172 113 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 KNOP1Q1ED39 458 aaKnown RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 BANK1Q8NDB2 785 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 CALR3Q96L12 384 aaKnown RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 PARD6BQ9BYG5 372 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 WDR70Q9NW82 654 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 TXNDC9O14530 226 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 ZNF34Q8IZ26 560 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 TOPORSQ9NS56 1045 aaPredicted RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 SETD1BQ9UPS6 1966 aaKnown RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 TRIM49BA6NDI0 452 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 SEC31AO94979 1220 aaKnown RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 ATP2C1P98194 919 aaPredicted RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 DR1Q01658 176 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 BZW1Q7L1Q6 419 aaKnown RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 C2orf69Q8N8R5 385 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 TMEM35BQ8NCS4 154 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 ABHD10Q9NUJ1 306 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 ARHGEF40Q8TER5 1519 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 CASP1P29466 404 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 IFNAR2P48551 515 aa17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
SH3BP4-203ENST00000409212 GNAT1P11488 350 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 PHKA2P46019 1235 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 EIF3BP55884 814 aaKnown RBP17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 ASPHQ12797 758 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 ALS2CLQ60I27 953 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 CCDC197Q8NCU1 140 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 GOLGA8QA0A0J9YX86 632 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 GOLGA8OA6NCC3 632 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 GOLGA8NF8WBI6 632 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 FMO2Q99518 471 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 LCMT1Q9UIC8 334 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 AKR1B1P15121 316 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 CUL1Q13616 776 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 LLGL1Q15334 1064 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 DSTYKQ6XUX3 929 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 RAPH1Q70E73 1250 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 RNF139Q8WU17 664 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 PSPC1Q8WXF1 523 aaKnown RBP17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 ADAM22Q9P0K1 906 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 CSF1RP07333 972 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 CLNS1AP54105 237 aaKnown RBP17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 C4orf50Q6ZRC1 276 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 CLEC17AQ6ZS10 378 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
SH3BP4-203ENST00000409212 ARL13BQ3SXY8 428 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 PPP1R16BQ96T49 567 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 CNOT10Q9H9A5 744 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 JCADQ9P266 1359 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 ANO9A1A5B4 782 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 IPO5O00410 1097 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 XPAP23025 273 aaPredicted RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 RBBP5Q15291 538 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 EVI5O60447 810 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 PSMC5P62195 406 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 MKRN3Q13064 507 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 GLE1Q53GS7 698 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 NAALADL2Q58DX5 795 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 EMBQ6PCB8 327 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 STOX1Q6ZVD7 989 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 PDIK1LQ8N165 341 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 OR6B3Q8NGW1 331 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 KPNA2P52292 529 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 HDAC11Q96DB2 347 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 OSBPL5Q9H0X9 879 aaPredicted RBP17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 C2orf40Q9H1Z8 148 aa17.09■□□□□ 0.33
SH3BP4-203ENST00000409212 MT-ND3P03897 115 aa17.08■□□□□ 0.33
SH3BP4-203ENST00000409212 ANXA13P27216 316 aa17.08■□□□□ 0.33
SH3BP4-203ENST00000409212 COPB2P35606 906 aa17.08■□□□□ 0.33
SH3BP4-203ENST00000409212 RAB44Q7Z6P3 723 aaPredicted RBP17.08■□□□□ 0.33
SH3BP4-203ENST00000409212 EFCAB13Q8IY85 973 aa17.08■□□□□ 0.33
SH3BP4-203ENST00000409212 ACAD9Q9H845 621 aa17.08■□□□□ 0.33
SH3BP4-203ENST00000409212 DLC1Q96QB1 1528 aa17.08■□□□□ 0.33
SH3BP4-203ENST00000409212 SART1O43290 800 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms