RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 KCNJ6P48051 423 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 CKAP4Q07065 602 aaKnown RBP13.7□□□□□ -0.22
ATG9A-203ENST00000409033 AGBL3Q8NEM8 1001 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 ETNPPLQ8TBG4 499 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 C7orf43Q8WVR3 580 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 MMS19Q96T76 1030 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 ZMYND15Q9H091 742 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 LRRIQ4A6NIV6 560 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 KCNK3O14649 394 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 HNRNPDLO14979 420 aaKnown RBP13.7□□□□□ -0.22
ATG9A-203ENST00000409033 GNA14O95837 355 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 SPATA31C1P0DKV0 1188 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 SULF1Q8IWU6 871 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
ATG9A-203ENST00000409033 PACSIN1Q9BY11 444 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 GABBR1Q9UBS5 961 aa13.7□□□□□ -0.22
ATG9A-203ENST00000409033 LRRC10BA6NIK2 292 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 EDIL3O43854 480 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 OAS2P29728 719 aaKnown RBP13.69□□□□□ -0.22
ATG9A-203ENST00000409033 CLK2P49760 499 aaKnown RBP13.69□□□□□ -0.22
ATG9A-203ENST00000409033 SWSAP1Q6NVH7 229 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 MS4A14Q96JA4 679 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 CSADQ9Y600 493 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 PLIN4Q96Q06 1357 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 SLITRK3O94933 977 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 SSTR3P32745 418 aaPredicted RBP13.69□□□□□ -0.22
ATG9A-203ENST00000409033 PSMC2P35998 433 aaKnown RBP13.69□□□□□ -0.22
ATG9A-203ENST00000409033 STAT1P42224 750 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 LONRF2Q1L5Z9 754 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 NLGN2Q8NFZ4 835 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 WNK4Q96J92 1243 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 EIF3JO75822 258 aaKnown RBP13.69□□□□□ -0.22
ATG9A-203ENST00000409033 TNFAIP3P21580 790 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 MYL7Q01449 175 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 PDXDC1Q6P996 788 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 LRRC55Q6ZSA7 311 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 DPH6Q7L8W6 267 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 AS3MTQ9HBK9 375 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 ABCB6Q9NP58 842 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 REXO2Q9Y3B8 237 aaKnown RBP13.69□□□□□ -0.22
ATG9A-203ENST00000409033 ECM29Q5VYK3 1845 aa13.69□□□□□ -0.22
ATG9A-203ENST00000409033 SMTNP53814 917 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 SLC12A3P55017 1021 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 OTOP1Q7RTM1 612 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 RABGGTAQ92696 567 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 GLG1Q92896 1179 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 COL20A1Q9P218 1284 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 ESYT3A0FGR9 886 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 PALMO75781 387 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
ATG9A-203ENST00000409033 ITGB5P18084 799 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 MAP2K1Q02750 393 aaPredicted RBP13.68□□□□□ -0.22
ATG9A-203ENST00000409033 MCTP2Q6DN12 878 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 PSMD1Q99460 953 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 MXRA8Q9BRK3 442 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 PDE11AQ9HCR9 933 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 TYW1Q9NV66 732 aaKnown RBP13.68□□□□□ -0.22
ATG9A-203ENST00000409033 RNF181Q9P0P0 153 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 OPLAHO14841 1288 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 VSNL1P62760 191 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 WHAMMP3Q1A5X7 153 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 C8orf74Q6P047 294 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 DAAM2Q86T65 1068 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 ERGIC2Q96RQ1 377 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 DNAJC7Q99615 494 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 ACBD3Q9H3P7 528 aa13.68□□□□□ -0.22
ATG9A-203ENST00000409033 UBE2TQ9NPD8 197 aaPredicted RBP13.68□□□□□ -0.22
ATG9A-203ENST00000409033 A0A087X0T9 212 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 WDR46O15213 610 aaKnown RBP13.67□□□□□ -0.22
ATG9A-203ENST00000409033 FAM228BP0C875 321 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 ARHGAP25P42331 645 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 QARSP47897 775 aaKnown RBP13.67□□□□□ -0.22
ATG9A-203ENST00000409033 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 IGBP1P78318 339 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 SND1Q7KZF4 910 aaKnown RBP eCLIP13.67□□□□□ -0.227e-8■□□□□ 10
ATG9A-203ENST00000409033 GLYCTKQ8IVS8 523 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 CCDC170Q8IYT3 715 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 TRPM4Q8TD43 1214 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 SMCHD1A6NHR9 2005 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 ICAM1P05362 532 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 TNNI1P19237 187 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 SMC1AQ14683 1233 aaKnown RBP13.67□□□□□ -0.22
ATG9A-203ENST00000409033 ALKBH5Q6P6C2 394 aaKnown RBP13.67□□□□□ -0.22
ATG9A-203ENST00000409033 ZNF280CQ8ND82 737 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 COG1Q8WTW3 980 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 PNKPQ96T60 521 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 CEP72Q9P209 647 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 RGS17Q9UGC6 210 aaPredicted RBP13.67□□□□□ -0.22
ATG9A-203ENST00000409033 ATP9AO75110 1047 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 YWHABP31946 246 aaKnown RBP13.67□□□□□ -0.22
ATG9A-203ENST00000409033 TKFCQ3LXA3 575 aa13.67□□□□□ -0.22
ATG9A-203ENST00000409033 ELP3Q9H9T3 547 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms