RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PRRC2BQ5JSZ5 2229 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 IGKV6D-21A0A0A0MT36 114 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 ABHD14A-ACY1A0A1B0GW23 586 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 MBLAC1A4D2B0 266 aaPredicted RBP10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 IPO5O00410 1097 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 ATG7O95352 703 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 PARNO95453 639 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 GNAT1P11488 350 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 ATP4AP20648 1035 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 SSR1P43307 286 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 AKAP17AQ02040 695 aaKnown RBP10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 GABPB1Q06547 395 aaPredicted RBP10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 NPY5RQ15761 445 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 PRR16Q569H4 304 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 MYOCDQ8IZQ8 938 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 ZBED2Q9BTP6 218 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 GLT8D2Q9H1C3 349 aa10.94□□□□□ -0.66
NIF3L1-202ENST00000409020 LPXNO60711 386 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 LARGE1O95461 756 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 STAT5BP51692 787 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 LPIN1Q14693 890 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 FAM26DQ5JW98 314 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 NIPA1Q7RTP0 329 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 TRMT1LQ7Z2T5 733 aaKnown RBP10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 PIP4P2Q8N4L2 257 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 GDPD5Q8WTR4 605 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 CCDC12Q8WUD4 166 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 ZNF274Q96GC6 653 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 ZNF577Q9BSK1 485 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 IFIH1Q9BYX4 1025 aaKnown RBP10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 AZI2Q9H6S1 392 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 KCNJ14Q9UNX9 436 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 MTCH2Q9Y6C9 303 aa10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 COL4A4P53420 1690 aaPredicted RBP10.93□□□□□ -0.66
NIF3L1-202ENST00000409020 LINC01553A4QN01 128 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 ZBTB42B2RXF5 422 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 M0R2N6 131 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 BACH1O14867 736 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 MSH4O15457 936 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 CAND2O75155 1236 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 UPP2O95045 317 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 CTDNEP1O95476 244 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 GNA11P29992 359 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 SSRP1Q08945 709 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 SWSAP1Q6NVH7 229 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 TAF2Q6P1X5 1199 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 PLPPR4Q7Z2D5 763 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 LINC01599Q8WXQ3 324 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 RAD9AQ99638 391 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 NCAPGQ9BPX3 1015 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 AGO3Q9H9G7 860 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 CDY2AQ9Y6F7 541 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 MICAL3Q7RTP6 2002 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 POTEB3A0JP26 581 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 KIF28PB7ZC32 967 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 CPLX1O14810 134 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 TDP2O95551 362 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 CIITAP33076 1130 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 AK2P54819 239 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 NLRP5P59047 1200 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 GRB10Q13322 594 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 FBXO47Q5MNV8 452 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 POTEBQ6S5H4 581 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 MTHFD1LQ6UB35 978 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 SASS6Q6UVJ0 657 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 RPAINQ86UA6 219 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 OTUD6BQ8N6M0 293 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 NECAB1Q8N987 351 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 CCDC148Q8NFR7 591 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 TBCKQ8TEA7 893 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 SEPT8Q92599 483 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 C17orf80Q9BSJ5 609 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 RYDENQ9NUL5 291 aaKnown RBP10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 PCDHA4Q9UN74 947 aa10.92□□□□□ -0.66
NIF3L1-202ENST00000409020 MAP3K13O43283 966 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 ZNF500O60304 480 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 DEXIO95424 95 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 AMHP03971 560 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 CCDC172P0C7W6 258 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 CD52P31358 61 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 MRPS6P82932 125 aaKnown RBP10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 HTRA4P83105 476 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 BECN1Q14457 450 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 ZKSCAN8Q15776 578 aaPredicted RBP10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 UGCGQ16739 394 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 TRIM22Q8IYM9 498 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 BICD2Q8TD16 824 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 ATP8B4Q8TF62 1192 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 PPP1R16BQ96T49 567 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 MFRPQ9BY79 579 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 SUGCTQ9HAC7 445 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 ZNF302Q9NR11 478 aa10.91□□□□□ -0.66
NIF3L1-202ENST00000409020 WDFY4Q6ZS81 3184 aa10.9□□□□□ -0.66
NIF3L1-202ENST00000409020 RRN3P2A6NIE6 340 aa10.9□□□□□ -0.66
NIF3L1-202ENST00000409020 CHMP2AO43633 222 aa10.9□□□□□ -0.66
NIF3L1-202ENST00000409020 PFKFB2O60825 505 aa10.9□□□□□ -0.66
NIF3L1-202ENST00000409020 EFCAB14O75071 495 aa10.9□□□□□ -0.66
NIF3L1-202ENST00000409020 KLRC1P26715 233 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms