RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 GAS2O43903 313 aaKnown RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 TPM1P09493 284 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 TM4SF4P48230 202 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 COPB1P53618 953 aaKnown RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 SMTNP53814 917 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 LAMC2Q13753 1193 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 GRB14Q14449 540 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 KRT31Q15323 416 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 XKR9Q5GH70 373 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 CELF3Q5SZQ8 465 aaKnown RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 SWSAP1Q6NVH7 229 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 CCDC62Q6P9F0 684 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 SEPT14Q6ZU15 432 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 PLPPR4Q7Z2D5 763 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 ZNF720Q7Z2F6 126 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 IRF2BP1Q8IU81 584 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 FAM178BQ8IXR5 827 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 MYCT1Q8N699 235 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 SPC24Q8NBT2 197 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 RETREG2Q8NC44 543 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 CCDC112Q8NEF3 446 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 SCFD1Q8WVM8 642 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 FGD4Q96M96 766 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 NAP1L5Q96NT1 182 aaPredicted RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 JPH2Q9BR39 696 aaPredicted RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 NTPCRQ9BSD7 190 aaKnown RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 NUP58Q9BVL2 599 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 RUSC1Q9BVN2 902 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 PORCNQ9H237 461 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 KCTD10Q9H3F6 313 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 ZHX3Q9H4I2 956 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 TMEM206Q9H813 350 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 EFCC1Q9HA90 598 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 ZFYVE28Q9HCC9 887 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 ZNF302Q9NR11 478 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 TYW1Q9NV66 732 aaKnown RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 WRAP73Q9P2S5 460 aaPredicted RBP11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 GABBR1Q9UBS5 961 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 FAM184BQ9ULE4 1060 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 LRRC37A2A6NM11 1700 aa11.4□□□□□ -0.58
SNORD88C-201ENST00000408061 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 TLR2O60603 784 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 LGR5O75473 907 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 FARP2O94887 1054 aaPredicted RBP11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 PLS3P13797 630 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 UBA1P22314 1058 aaKnown RBP11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 ADORA2AP29274 412 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 RFC5P40937 340 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 KCNJ6P48051 423 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 SP2Q02086 613 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 FSTL1Q12841 308 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 TAF1CQ15572 869 aaPredicted RBP11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 ODR4Q5SWX8 454 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 IQSEC1Q6DN90 963 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 CYFIP1Q7L576 1253 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 GPR142Q7Z601 462 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 DPP9Q86TI2 863 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 SFR1Q86XK3 245 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 IFNL1Q8IU54 200 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 LRRC8AQ8IWT6 810 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 DHX37Q8IY37 1157 aaKnown RBP11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 EMID1Q96A84 441 aaPredicted RBP11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 CCDC51Q96ER9 411 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 ABHD16BQ9H3Z7 469 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 AZI2Q9H6S1 392 aa11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 METTL14Q9HCE5 456 aaKnown RBP11.39□□□□□ -0.59
SNORD88C-201ENST00000408061 PHLPP2Q6ZVD8 1323 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 EMSYQ7Z589 1322 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 ADGRA2Q96PE1 1338 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 NPHP3-ACAD11A0A0J9YXS1 232 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 GSTTP1A0A1W2PQM5 241 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 LGALS16A8MUM7 142 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 BACH1O14867 736 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 ZNF500O60304 480 aaPredicted RBP11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 HIP1RO75146 1068 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 TOMM70O94826 608 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 STBD1O95210 358 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 GCNT3O95395 438 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 GGPS1O95749 300 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 PGK2P07205 417 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 PBX1P40424 430 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 MTIF2P46199 727 aaKnown RBP11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 STAT5BP51692 787 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 PMS1P54277 932 aaKnown RBP11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 TBX2Q13207 712 aaPredicted RBP11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 MAN2A1Q16706 1144 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 FKBP15Q5T1M5 1219 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 C17orf99Q6UX52 265 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 ANO5Q75V66 913 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 ARMCX2Q7L311 632 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 HS2ST1Q7LGA3 356 aa11.38□□□□□ -0.59
SNORD88C-201ENST00000408061 TMC6Q7Z403 805 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms