RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 CCT8L1PA6NM43 557 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 RGS16O15492 202 aaPredicted RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 KCNQ2O43526 872 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 DIAPH2O60879 1101 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 PLA2G4BP0C869 781 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 PLCG2P16885 1265 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 CDK8P49336 464 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 TNIP1Q15025 636 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 KCTD1Q719H9 257 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 CCDC26Q8TAB7 109 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 MICAL1Q8TDZ2 1067 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 ELMO3Q96BJ8 720 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 C18orf8Q96DM3 657 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 MTMR9Q96QG7 549 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 KCNK9Q9NPC2 374 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 ARMCX3Q9UH62 379 aaPredicted RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 TRPM3Q9HCF6 1732 aaPredicted RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 TBC1D10BQ4KMP7 808 aaPredicted RBP10.4□□□□□ -0.74
SMC1B-202ENST00000404354 ZNF746Q6NUN9 644 aaPredicted RBP10.4□□□□□ -0.74
SMC1B-202ENST00000404354 PALB2Q86YC2 1186 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 CPNE8Q86YQ8 564 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 SLC17A8Q8NDX2 589 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 PLCD4Q9BRC7 762 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 TAS2R14Q9NYV8 317 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 SRP68Q9UHB9 627 aaKnown RBP10.4□□□□□ -0.74
SMC1B-202ENST00000404354 COL5A2P05997 1499 aaPredicted RBP10.4□□□□□ -0.74
SMC1B-202ENST00000404354 IGSF9BQ9UPX0 1349 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 LOC102724428A0A0B4J2F2 783 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 ENO4A6NNW6 628 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 RBAK-RBAKDNI3L0D1 243 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 UBOX5O94941 541 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 ANP32DO95626 131 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 MYBP10242 640 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 VPS41P49754 854 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 ADCY7P51828 1080 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 SIK1P57059 783 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 FBXO33Q7Z6M2 555 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 RUBCNQ92622 972 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
SMC1B-202ENST00000404354 POP1Q99575 1024 aaKnown RBP10.4□□□□□ -0.74
SMC1B-202ENST00000404354 RAB34Q9BZG1 259 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 GANQ9H2C0 597 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 MAGEF1Q9HAY2 307 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 RIC8AQ9NPQ8 531 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 BSDC1Q9NW68 430 aaPredicted RBP10.4□□□□□ -0.74
SMC1B-202ENST00000404354 TBK1Q9UHD2 729 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 TMEM59LQ9UK28 342 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 MYH7BA7E2Y1 1941 aa10.4□□□□□ -0.74
SMC1B-202ENST00000404354 ACSL3O95573 720 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 PCP11498 1178 aaKnown RBP10.4□□□□□ -0.75
SMC1B-202ENST00000404354 GCFC2P16383 781 aaKnown RBP10.4□□□□□ -0.75
SMC1B-202ENST00000404354 PON1P27169 355 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 RFC4P35249 363 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 MARCKSL1P49006 195 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 DR1Q01658 176 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 BIRC3Q13489 604 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 TRIM68Q6AZZ1 485 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 SLC35G2Q8TBE7 412 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 AGAP11Q8TF27 550 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 HAS1Q92839 578 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 SPDL1Q96EA4 605 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.4□□□□□ -0.75
SMC1B-202ENST00000404354 GCNT4Q9P109 453 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 SAMD15Q9P1V8 674 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 PNMA3Q9UL41 463 aa10.4□□□□□ -0.75
SMC1B-202ENST00000404354 TIAM2Q8IVF5 1701 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 MPHOSPH10O00566 681 aaKnown RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 DDX3XO00571 662 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 AKAP3O75969 853 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 PPP1R2P41236 205 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 TRIP13Q15645 432 aaPredicted RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 LONRF1Q17RB8 773 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 DENND2CQ68D51 928 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 ANKS4BQ8N8V4 417 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 LRRC57Q8N9N7 239 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 PAIP2Q9BPZ3 127 aaKnown RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 FGFR1OP2Q9NVK5 253 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 STK17AQ9UEE5 414 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 AMFRQ9UKV5 643 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 DAAM1Q9Y4D1 1078 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 GCKP35557 465 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 RNASELQ05823 741 aaKnown RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 ZCWPW2Q504Y3 356 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 LRIG3Q6UXM1 1119 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 PHLDB2Q86SQ0 1253 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 SFR1Q86XK3 245 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 CCDC65Q8IXS2 484 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 CUL5Q93034 780 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 ARHGEF26Q96DR7 871 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 PBKQ96KB5 322 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 ATMINO43313 823 aaPredicted RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 FLOT1O75955 427 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 PMS2P54278 862 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 MAP2K1Q02750 393 aaPredicted RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 ERMARDQ5T6L9 678 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 WLSQ5T9L3 541 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 DAGLBQ8NCG7 672 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 SPIRE2Q8WWL2 714 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms