RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SUPT20HL2P0C7V6 817 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 PPP4R3CPQ6ZMV5 832 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 TC2NQ8N9U0 490 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 MPHOSPH6Q99547 160 aaKnown RBP28.32■■■□□ 2.12
CPNE1-205ENST00000401607 TRAF3IP3Q9Y228 551 aa28.32■■■□□ 2.12
CPNE1-205ENST00000401607 SYNGAP1Q96PV0 1343 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 EIF3DO15371 548 aaKnown RBP eCLIP28.31■■■□□ 2.12
CPNE1-205ENST00000401607 ATG7O95352 703 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 NPEPPSP55786 919 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 EDRF1Q3B7T1 1238 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 MIS18BP1Q6P0N0 1132 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 EEPD1Q7L9B9 569 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 MORC4Q8TE76 937 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 CEP63Q96MT8 703 aa28.31■■■□□ 2.12
CPNE1-205ENST00000401607 IGSF9BQ9UPX0 1349 aa28.3■■■□□ 2.12
CPNE1-205ENST00000401607 DKC1O60832 514 aaKnown RBP eCLIP28.3■■■□□ 2.12
CPNE1-205ENST00000401607 NOLC1Q14978 699 aaKnown RBP eCLIP28.3■■■□□ 2.123e-8■□□□□ 8.2
CPNE1-205ENST00000401607 XKR9Q5GH70 373 aa28.3■■■□□ 2.12
CPNE1-205ENST00000401607 MAEAQ7L5Y9 396 aa28.3■■■□□ 2.12
CPNE1-205ENST00000401607 TRMT1LQ7Z2T5 733 aaKnown RBP28.3■■■□□ 2.12
CPNE1-205ENST00000401607 CCDC43Q96MW1 224 aaKnown RBP28.3■■■□□ 2.12
CPNE1-205ENST00000401607 TMX1Q9H3N1 280 aa28.3■■■□□ 2.12
CPNE1-205ENST00000401607 SPTLC3Q9NUV7 552 aa28.3■■■□□ 2.12
CPNE1-205ENST00000401607 PLXNB2O15031 1838 aa28.3■■■□□ 2.12
CPNE1-205ENST00000401607 FARP2O94887 1054 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-205ENST00000401607 KCNA1Q09470 495 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 ODR4Q5SWX8 454 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 ZNF720Q7Z2F6 126 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 FAM178BQ8IXR5 827 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 PARK7Q99497 189 aaKnown RBP28.29■■■□□ 2.12
CPNE1-205ENST00000401607 NOC4LQ9BVI4 516 aaKnown RBP28.29■■■□□ 2.12
CPNE1-205ENST00000401607 MYH11P35749 1972 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 ARID2Q68CP9 1835 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 ZMYM2Q9UBW7 1377 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 A0A1W2PQC6 194 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 PDXKO00764 312 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 TGFB3P10600 412 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 DNM2P50570 870 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 ADKP55263 362 aaKnown RBP28.29■■■□□ 2.12
CPNE1-205ENST00000401607 RBL2Q08999 1139 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 ZC2HC1CQ53FD0 456 aaPredicted RBP28.29■■■□□ 2.12
CPNE1-205ENST00000401607 RASAL3Q86YV0 1011 aa28.29■■■□□ 2.12
CPNE1-205ENST00000401607 TPM2P07951 284 aa28.28■■■□□ 2.12
CPNE1-205ENST00000401607 TIPINQ9BVW5 301 aa28.28■■■□□ 2.12
CPNE1-205ENST00000401607 TYW1Q9NV66 732 aaKnown RBP28.28■■■□□ 2.12
CPNE1-205ENST00000401607 UBE4BO95155 1302 aa28.28■■■□□ 2.12
CPNE1-205ENST00000401607 LOC102724159A0A0B4J2E5 919 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 PES1O00541 588 aaKnown RBP28.27■■■□□ 2.12
CPNE1-205ENST00000401607 ARIH2O95376 493 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 GYPCP04921 128 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 PRKCEQ02156 737 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 NEDD9Q14511 834 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 PWP2Q15269 919 aaKnown RBP28.27■■■□□ 2.12
CPNE1-205ENST00000401607 OTUD6AQ7L8S5 288 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 TMEM139Q8IV31 216 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 STRA6Q9BX79 667 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 MAN2A1Q16706 1144 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 PPFIBP1Q86W92 1011 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 CCDC112Q8NEF3 446 aa28.27■■■□□ 2.12
CPNE1-205ENST00000401607 DDX41Q9UJV9 622 aaKnown RBP28.27■■■□□ 2.12
CPNE1-205ENST00000401607 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.27■■■□□ 2.128e-7■□□□□ 11.3
CPNE1-205ENST00000401607 MAFBQ9Y5Q3 323 aaPredicted RBP28.27■■■□□ 2.12
CPNE1-205ENST00000401607 IGKV6D-21A0A0A0MT36 114 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 GSTTP1A0A1W2PQM5 241 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 DCAF8L1A6NGE4 600 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 AKR1B15C9JRZ8 316 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-205ENST00000401607 TGFB1I1O43294 461 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 PPP1R37O75864 691 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 MARSP56192 900 aaKnown RBP28.26■■■□□ 2.11
CPNE1-205ENST00000401607 LY6KQ17RY6 165 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 ZNF792Q3KQV3 632 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 VWA3BQ502W6 1294 aa28.26■■■□□ 2.11
CPNE1-205ENST00000401607 FBXO16Q8IX29 292 aaPredicted RBP28.26■■■□□ 2.11
CPNE1-205ENST00000401607 LARSQ9P2J5 1176 aaKnown RBP28.26■■■□□ 2.11
CPNE1-205ENST00000401607 CALUO43852 315 aaPredicted RBP28.25■■■□□ 2.11
CPNE1-205ENST00000401607 GGPS1O95749 300 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 PLS3P13797 630 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 NR2F2P24468 414 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 ADORA2AP29274 412 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 ADAM9Q13443 819 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 CEP170P1Q96L14 293 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 GPRC5CQ9NQ84 441 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 ZNF302Q9NR11 478 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 MCM3APO60318 1980 aa28.25■■■□□ 2.11
CPNE1-205ENST00000401607 MFAP3LO75121 409 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 GNA14O95837 355 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 MAPTP10636 758 aaKnown RBP28.24■■■□□ 2.11
CPNE1-205ENST00000401607 ATP4AP20648 1035 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 CASP14P31944 242 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 FXR1P51114 621 aaKnown RBP eCLIP28.24■■■□□ 2.11
CPNE1-205ENST00000401607 ZNF157P51786 506 aaPredicted RBP28.24■■■□□ 2.11
CPNE1-205ENST00000401607 TBC1D8BQ0IIM8 1120 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 METTL7BQ6UX53 244 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 KSR1Q8IVT5 923 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 ABRAQ8N0Z2 381 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 CPLX3Q8WVH0 158 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 DRC1Q96MC2 740 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 IKZF4Q9H2S9 585 aa28.24■■■□□ 2.11
CPNE1-205ENST00000401607 SEPT9Q9UHD8 586 aaPredicted RBP28.24■■■□□ 2.11
CPNE1-205ENST00000401607 PLXNA1Q9UIW2 1896 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms