RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 MMP19Q99542 508 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 PCDHA6Q9UN73 950 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 PCDHA8Q9Y5H6 950 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 ATP7AQ04656 1500 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 BBOX1O75936 387 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 MMP1P03956 469 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 CTSHP09668 335 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 GCLMP48507 274 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 LMBRD2Q68DH5 695 aaPredicted RBP14.78□□□□□ -0.04
VAPA-202ENST00000400000 KCTD17Q8N5Z5 321 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 RFWD2Q8NHY2 731 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 RAET1EQ8TD07 263 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 CCDC17Q96LX7 622 aa14.78□□□□□ -0.04
VAPA-202ENST00000400000 PALLDQ8WX93 1383 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 TMEM2Q9UHN6 1383 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 GAP43P17677 238 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 MKRN4PQ13434 485 aaPredicted RBP14.77□□□□□ -0.04
VAPA-202ENST00000400000 RASGRF1Q13972 1273 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 LBRQ14739 615 aaKnown RBP14.77□□□□□ -0.04
VAPA-202ENST00000400000 NSUN7Q8NE18 718 aaKnown RBP14.77□□□□□ -0.04
VAPA-202ENST00000400000 PYROXD1Q8WU10 500 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 DFFAO00273 331 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 PER1O15534 1290 aaPredicted RBP14.77□□□□□ -0.04
VAPA-202ENST00000400000 ANP32DO95626 131 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 DDX53Q86TM3 631 aaKnown RBP14.77□□□□□ -0.04
VAPA-202ENST00000400000 SAAL1Q96ER3 474 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 WDR11Q9BZH6 1224 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 EPS15L1Q9UBC2 864 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
VAPA-202ENST00000400000 PRPF4O43172 522 aaKnown RBP eCLIP14.77□□□□□ -0.05
VAPA-202ENST00000400000 UBE3CQ15386 1083 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 RBBP7Q16576 425 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 SWSAP1Q6NVH7 229 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 FBXO18Q8NFZ0 1043 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 UBA6A0AVT1 1052 aaPredicted RBP14.77□□□□□ -0.05
VAPA-202ENST00000400000 ANKRD65E5RJM6 399 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 GRAPQ13588 217 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 GRAPLQ8TC17 118 aaPredicted RBP14.77□□□□□ -0.05
VAPA-202ENST00000400000 SPON2Q9BUD6 331 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 SPP2Q13103 211 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 PAGE5Q96GU1 130 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 DYDC2Q96IM9 177 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 FAN1Q9Y2M0 1017 aa14.77□□□□□ -0.05
VAPA-202ENST00000400000 SYF2O95926 243 aaKnown RBP14.76□□□□□ -0.05
VAPA-202ENST00000400000 RECQLP46063 649 aaPredicted RBP14.76□□□□□ -0.05
VAPA-202ENST00000400000 RTKN2Q8IZC4 609 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 PGBD3Q8N328 593 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 Q9H521 79 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 TMEM206Q9H813 350 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 KLHL11Q9NVR0 708 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 USP17L10C9JJH3 530 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 IMPG1Q17R60 797 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 ARL13BQ3SXY8 428 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 TMEM270Q6UE05 265 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 SAYSD1Q9NPB0 183 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 ZNF233A6NK53 670 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 SUN1O94901 812 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 PRDX5P30044 214 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 ZNF211Q13398 564 aaPredicted RBP14.76□□□□□ -0.05
VAPA-202ENST00000400000 ARMCX2Q7L311 632 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 FOXP1Q9H334 677 aaPredicted RBP14.76□□□□□ -0.05
VAPA-202ENST00000400000 E2F8A0AVK6 867 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 SH2B2O14492 632 aaPredicted RBP14.76□□□□□ -0.05
VAPA-202ENST00000400000 SNX2O60749 519 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 SEPT2Q15019 361 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 MAN2A1Q16706 1144 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 A0A0G2JND7 137 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 TAS2R42Q7RTR8 314 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 EXOC8Q8IYI6 725 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 BBOF1Q8ND07 529 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 SH3KBP1Q96B97 665 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 NDFIP2Q9NV92 336 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 ANAPC7Q9UJX3 599 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 PNMA3Q9UL41 463 aa14.76□□□□□ -0.05
VAPA-202ENST00000400000 SNCBQ16143 134 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 CCDC197Q8NCU1 140 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 HAUS4Q9H6D7 363 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 RBM6P78332 1123 aaKnown RBP14.75□□□□□ -0.05
VAPA-202ENST00000400000 GLE1Q53GS7 698 aaKnown RBP14.75□□□□□ -0.05
VAPA-202ENST00000400000 CLDN3O15551 220 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 KCNQ2O43526 872 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 CTNND1O60716 968 aaKnown RBP14.75□□□□□ -0.05
VAPA-202ENST00000400000 MCTP2Q6DN12 878 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 RNF25Q96BH1 459 aaPredicted RBP14.75□□□□□ -0.05
VAPA-202ENST00000400000 VPS11Q9H270 941 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 CLCA2Q9UQC9 943 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 OCM2P0CE71 109 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 OCMP0CE72 109 aaPredicted RBP14.75□□□□□ -0.05
VAPA-202ENST00000400000 CPB1P15086 417 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 ZNF699Q32M78 642 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 EFCAB13Q8IY85 973 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 PNMA6FA0A0J9YX94 578 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 HSPA4LO95757 839 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 MXD3Q9BW11 206 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 KDM5AP29375 1690 aaKnown RBP14.75□□□□□ -0.05
VAPA-202ENST00000400000 NPHP3-ACAD11A0A0J9YXS1 232 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 M0QYV0 167 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 ANKRD20A4Q4UJ75 823 aa14.75□□□□□ -0.05
VAPA-202ENST00000400000 ANKRD20A8PQ5CZ79 823 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms