RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 ITGAXP20702 1163 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 ADKP55263 362 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 ZSCAN26Q16670 478 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 TTC38Q5R3I4 469 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 OR9Q1Q8NGQ5 310 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 AFG1LQ8WV93 481 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 NUDCD1Q96RS6 583 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 NT5C3AQ9H0P0 336 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 ZMYND10O75800 440 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 PDE6CP51160 858 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 PAK1Q13153 545 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 PPP2R5BQ15173 497 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 HSPH1Q92598 858 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 COQ7Q99807 217 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 PTPN23Q9H3S7 1636 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 CPB1P15086 417 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 POMGNT2Q8NAT1 580 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 MYO3BQ8WXR4 1341 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 SBNO1A3KN83 1393 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 F13A1P00488 732 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 SRGAP2CP0DJJ0 459 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 BASP1P80723 227 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 E2F4Q16254 413 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 KCTD1Q719H9 257 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 GPBP1Q86WP2 473 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 ZBTB18Q99592 522 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 SESN1Q9Y6P5 492 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
CACNA1C-217ENST00000399641 ARHGAP6O43182 974 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 DDHD2O94830 711 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 FCGRTP55899 365 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 PARK7Q99497 189 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 TRPC7Q9HCX4 862 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 NUP62P37198 522 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 THEMIS2Q5TEJ8 643 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 DARS2Q6PI48 645 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 RNASE11Q8TAA1 199 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 AGR3Q8TD06 166 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 ZNF496Q96IT1 587 aaPredicted RBP11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 ENC1O14682 589 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 ECE2O60344 883 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 FAM161BQ96MY7 647 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 BBS2Q9BXC9 721 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 PCDHB4Q9Y5E5 795 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 C10orf53Q8N6V4 93 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 FAM167BQ9BTA0 163 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 DDX25Q9UHL0 483 aaKnown RBP11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 MYO1GB0I1T2 1018 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 GOLGA8SH3BPF8 625 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 TADA3O75528 432 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 BTBD8Q5XKL5 378 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 KRT74Q7RTS7 529 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 RNF135Q8IUD6 432 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 DBNDD2Q9BQY9 259 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 SOX13Q9UN79 622 aa11.91□□□□□ -0.5
CACNA1C-217ENST00000399641 ABCA10Q8WWZ4 1543 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 DUOX2Q9NRD8 1548 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 ENO4A6NNW6 628 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 SNUPNO95149 360 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 PSAPP07602 524 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 ARMCX2Q7L311 632 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 HAUS6Q7Z4H7 955 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 NLRP14Q86W24 1093 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 PPIEQ9UNP9 301 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 PHKG2P15735 406 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 CDO1Q16878 200 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 MDH1BQ5I0G3 518 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 PDXDC2PQ6P474 469 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 ARHGEF18Q6ZSZ5 1173 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 PCGF5Q86SE9 256 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 NEUROD4Q9HD90 331 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 TEX28O15482 410 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 CHEK2O96017 543 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 RFX3P48380 749 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 ARF3P61204 181 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 ARF1P84077 181 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 PARVGQ9HBI0 331 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 ANGPTL2Q9UKU9 493 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 HPCAL4Q9UM19 191 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 CYP2B6P20813 491 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 RPS6P62753 249 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 TUBB4BP68371 445 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 ZBTB38Q8NAP3 1195 aaPredicted RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 CEP170P1Q96L14 293 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 MYL10Q9BUA6 226 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 LSG1Q9H089 658 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 DHX36Q9H2U1 1008 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 FBXO40Q9UH90 709 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 SYNPO2Q9UMS6 1093 aa11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 TMA7Q9Y2S6 64 aaKnown RBP11.9□□□□□ -0.5
CACNA1C-217ENST00000399641 GOLGA8QA0A0J9YX86 632 aa11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 GOLGA8OA6NCC3 632 aa11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 GOLGA8JA6NMD2 632 aa11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 GOLGA8NF8WBI6 632 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms