RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 C16orf72Q14CZ0 275 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CDC37Q16543 378 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 FAM71BQ8TC56 605 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 SATB2Q9UPW6 733 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 TRAPPC3O43617 180 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 ARHGDIAP52565 204 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 WHAMMP3Q1A5X7 153 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 PGBD4Q96DM1 585 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 FAM167AQ96KS9 214 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 RMDN3Q96TC7 470 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 INTUQ9ULD6 942 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 PIN4Q9Y237 131 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CFAP65Q6ZU64 1925 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CYP2E1P05181 493 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 APOA4P06727 396 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 ABCD1P33897 745 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CACNB1Q02641 598 aaPredicted RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 ASPHQ12797 758 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CARSP49589 748 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 C11orf74Q86VG3 221 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 DDX42Q86XP3 938 aaKnown RBP eCLIP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 FBXL13Q8NEE6 735 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 CCDC138Q96M89 665 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 SLC39A2Q9NP94 309 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 SERTAD1Q9UHV2 236 aa11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 SRPRBQ9Y5M8 271 aaKnown RBP11.76□□□□□ -0.53
CACNA1C-216ENST00000399638 EFCAB8A8MWE9 144 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 ALDH1A2O94788 518 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 PCCAP05165 728 aaPredicted RBP11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 GSPT1P15170 499 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 OR1G1P47890 313 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 ADAM9Q13443 819 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 SPOPLQ6IQ16 392 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 UHMK1Q8TAS1 419 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 FEM1BQ9UK73 627 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 PCDHB8Q9UN66 801 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 TNKSO95271 1327 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 MCF2LO15068 1137 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 ALDH1A3P47895 512 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 CENPAP49450 140 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 ANKRD20A3Q5VUR7 823 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 C9orf131Q5VYM1 1079 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 TLK1Q9UKI8 766 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 A0A1W2PP64 1363 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 GOLGA8IPA6NC78 632 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 GOLGA8JA6NMD2 632 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 CHL1O00533 1208 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 RCN2Q14257 317 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 CAPRIN1Q14444 709 aaKnown RBP11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 UBE2SQ16763 222 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 FOXR1Q6PIV2 292 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 NFE2L3Q9Y4A8 694 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 CLIC2O15247 247 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 ARHGAP6O43182 974 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 ATF2P15336 505 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 DNAJC24Q6P3W2 148 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 CENPKQ9BS16 269 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 CAPN10Q9HC96 672 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 IPPQ9Y573 584 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 SNX14Q9Y5W7 946 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 KRT1P04264 644 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 CETPP11597 493 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 SCG2P13521 617 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 NME3Q13232 169 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 BCAP29Q9UHQ4 241 aa11.75□□□□□ -0.53
CACNA1C-216ENST00000399638 PAMP19021 973 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 TBL3Q12788 808 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 KRT40Q6A162 431 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 POLR3CQ9BUI4 534 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 AKAP7Q9P0M2 348 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 ARHGAP10A1A4S6 786 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 ANP32DO95626 131 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 FANCCQ00597 558 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 MTMR1Q13613 665 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 LRRC24Q50LG9 513 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 SPATS2Q86XZ4 545 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 TAGAPQ8N103 731 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 RNF146Q9NTX7 359 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L15C9J2P7 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L13C9JLJ4 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L11C9JVI0 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L18D6R9N7 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L22D6RA61 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L17D6RBQ6 530 aa11.74□□□□□ -0.53
CACNA1C-216ENST00000399638 USP17L19D6RCP7 530 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms