RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 LLGL2Q6P1M3 1020 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 SLC24A5Q71RS6 500 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 CASP10Q92851 521 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 TCF25Q9BQ70 676 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 ADAM7Q9H2U9 754 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 SMOC2Q9H3U7 446 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 POMKQ9H5K3 350 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 PUF60Q9UHX1 559 aaKnown RBP20.72■□□□□ 0.91
UFD1-202ENST00000399523 CDH22Q9UJ99 828 aa20.72■□□□□ 0.91
UFD1-202ENST00000399523 ITIH3Q06033 890 aa20.71■□□□□ 0.91
UFD1-202ENST00000399523 CES5AQ6NT32 575 aa20.71■□□□□ 0.91
UFD1-202ENST00000399523 ADAM2Q99965 735 aa20.71■□□□□ 0.91
UFD1-202ENST00000399523 UBIAD1Q9Y5Z9 338 aa20.71■□□□□ 0.91
UFD1-202ENST00000399523 DNAH14Q0VDD8 3507 aa20.71■□□□□ 0.91
UFD1-202ENST00000399523 CEP250Q9BV73 2442 aa20.7■□□□□ 0.91
UFD1-202ENST00000399523 MAFGO15525 162 aa20.7■□□□□ 0.9
UFD1-202ENST00000399523 IBSPP21815 317 aaPredicted RBP20.7■□□□□ 0.9
UFD1-202ENST00000399523 MTMR1Q13613 665 aa20.7■□□□□ 0.9
UFD1-202ENST00000399523 PLCB4Q15147 1175 aa20.7■□□□□ 0.9
UFD1-202ENST00000399523 ZDHHC14Q8IZN3 488 aa20.7■□□□□ 0.9
UFD1-202ENST00000399523 TRAPPC12Q8WVT3 735 aa20.7■□□□□ 0.9
UFD1-202ENST00000399523 SENP2Q9HC62 589 aa20.7■□□□□ 0.9
UFD1-202ENST00000399523 ENTPD7Q9NQZ7 604 aa20.7■□□□□ 0.9
UFD1-202ENST00000399523 DENND3A2RUS2 1198 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 FAM189BP81408 668 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 MTHFD1LQ6UB35 978 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 PLPPR4Q7Z2D5 763 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 MFSD1Q9H3U5 465 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 AZI2Q9H6S1 392 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 DIAPH3Q9NSV4 1193 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 TMEM161AQ9NX61 479 aa20.69■□□□□ 0.9
UFD1-202ENST00000399523 NOC2LQ9Y3T9 749 aaKnown RBP20.69■□□□□ 0.9
UFD1-202ENST00000399523 RPS6KA5O75582 802 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 ASGR2P07307 311 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 PDE4AP27815 886 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 MTHFRP42898 656 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 ODR4Q5SWX8 454 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 TMEM40Q8WWA1 233 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 PIBF1Q8WXW3 757 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 ELAC1Q9H777 363 aaKnown RBP20.68■□□□□ 0.9
UFD1-202ENST00000399523 ATP6V0A4Q9HBG4 840 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 JPH1Q9HDC5 661 aaPredicted RBP20.68■□□□□ 0.9
UFD1-202ENST00000399523 JADE2Q9NQC1 790 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 PKD2L1Q9P0L9 805 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 HCFC2Q9Y5Z7 792 aa20.68■□□□□ 0.9
UFD1-202ENST00000399523 EVPLQ92817 2033 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 IFIT3O14879 490 aaKnown RBP20.67■□□□□ 0.9
UFD1-202ENST00000399523 FGFR1P11362 822 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 HDAC1Q13547 482 aaPredicted RBP20.67■□□□□ 0.9
UFD1-202ENST00000399523 KCNT2Q6UVM3 1135 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 LRRC55Q6ZSA7 311 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 MRPL43Q8N983 215 aaKnown RBP20.67■□□□□ 0.9
UFD1-202ENST00000399523 SPZ1Q9BXG8 430 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 CDHR5Q9HBB8 845 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 SLC9A2Q9UBY0 812 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 LIMD1Q9UGP4 676 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 ST3GAL5Q9UNP4 418 aa20.67■□□□□ 0.9
UFD1-202ENST00000399523 OTOGLQ3ZCN5 2332 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 FRYLO94915 3013 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 HIP1O00291 1037 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 GPR182O15218 404 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 PPM1AP35813 382 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 STAT5BP51692 787 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 KRT17Q04695 432 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 CWF19L1Q69YN2 538 aaKnown RBP20.66■□□□□ 0.9
UFD1-202ENST00000399523 TMC7Q7Z402 723 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 KIAA0319LQ8IZA0 1049 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 PLCD3Q8N3E9 789 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 LNPKQ9C0E8 428 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 TMEM117Q9H0C3 514 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 GINS2Q9Y248 185 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 USTQ9Y2C2 406 aa20.66■□□□□ 0.9
UFD1-202ENST00000399523 C2orf71A6NGG8 1288 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 AOC1P19801 751 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 KLRC1P26715 233 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 SMARCA1P28370 1054 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 TRDNQ13061 729 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 CCDC105Q8IYK2 499 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 TDRD5Q8NAT2 981 aaKnown RBP20.65■□□□□ 0.9
UFD1-202ENST00000399523 RRP36Q96EU6 259 aaKnown RBP20.65■□□□□ 0.9
UFD1-202ENST00000399523 ZNF558Q96NG5 402 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 CASD1Q96PB1 797 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 OSBPL3Q9H4L5 887 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 PSTPIP2Q9H939 334 aa20.65■□□□□ 0.9
UFD1-202ENST00000399523 MED19A0JLT2 244 aaPredicted RBP20.64■□□□□ 0.89
UFD1-202ENST00000399523 ERICH2A1L162 156 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 PI15O43692 258 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 CLASP2O75122 1294 aaKnown RBP20.64■□□□□ 0.89
UFD1-202ENST00000399523 NPR3P17342 541 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 SLC26A2P50443 739 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 ACTR2P61160 394 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 SMC1AQ14683 1233 aaKnown RBP20.64■□□□□ 0.89
UFD1-202ENST00000399523 WTAPQ15007 396 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 RNF19AQ9NV58 838 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 SPG21Q9NZD8 308 aa20.64■□□□□ 0.89
UFD1-202ENST00000399523 NFASCO94856 1347 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 HOXA2O43364 376 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 WEE2P0C1S8 567 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 DSC3Q14574 896 aa20.63■□□□□ 0.89
UFD1-202ENST00000399523 ANGPT1Q15389 498 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms