RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ART3Q13508 389 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 TRIM50Q86XT4 487 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 OGFOD1Q8N543 542 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 STKLD1Q8NE28 680 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 P2RX5Q93086 422 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 CCDC28BQ9BUN5 200 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ATAD3AQ9NVI7 634 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ZNF839A8K0R7 811 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 AP3B1O00203 1094 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 CFLARO15519 480 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 HLA-DPA1P20036 260 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 ATG16L1Q676U5 607 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 LRRC8BQ6P9F7 803 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 STAG2Q8N3U4 1231 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 GDAP1Q8TB36 358 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 GRK7Q8WTQ7 553 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 FAM161BQ96MY7 647 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 LRRC37BQ96QE4 947 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 GLT8D2Q9H1C3 349 aa10.29□□□□□ -0.76
SMAD9-203ENST00000399275 GOLGA8JA6NMD2 632 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 GOLGA8TH3BQL2 631 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 EIF3HO15372 352 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 MOCS3O95396 460 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 HLA-DOAP06340 250 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 GOLGA8HP0CJ92 632 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 IFNAR1P17181 557 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 SERPINB8P50452 374 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 MDM2Q00987 491 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 KCNB1Q14721 858 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 MROH5Q6ZUA9 1318 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 ZSCAN10Q96SZ4 725 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 CAAP1Q9H8G2 361 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 ACTN1P12814 892 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 C4BPBP20851 252 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 KRT20P35900 424 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 FAPQ12884 760 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 KRT81Q14533 505 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 TEDDM1Q5T9Z0 273 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 ABHD8Q96I13 439 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 FHDC1Q9C0D6 1143 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 NT5C3AQ9H0P0 336 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 ATP8A1Q9Y2Q0 1164 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 SPHKAPQ2M3C7 1700 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 M0R2C6 588 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 ASNA1O43681 348 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 H2AFZP0C0S5 128 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 PCP11498 1178 aaKnown RBP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 PTPREP23469 700 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 MTTPP55157 894 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 BTKQ06187 659 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 LMBRD2Q68DH5 695 aaPredicted RBP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 H2AFVQ71UI9 128 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 PATL1Q86TB9 770 aaKnown RBP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 GRAMD1CQ8IYS0 662 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 TRPV6Q9H1D0 765 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 RIC8AQ9NPQ8 531 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 STK36Q9NRP7 1315 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 RNF103-CHMP3A0A140T963 221 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 TSC22D2O75157 780 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 RBM5P52756 815 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 MRPL12P52815 198 aaKnown RBP10.28□□□□□ -0.76
SMAD9-203ENST00000399275 ADCY1Q08828 1119 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 CALCRLQ16602 461 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 MAN2A1Q16706 1144 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 CYB5D1Q6P9G0 228 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 RNF207Q6ZRF8 634 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 DYMQ7RTS9 669 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 IL1RAPL1Q9NZN1 696 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 PLAAQ9Y263 795 aa10.28□□□□□ -0.76
SMAD9-203ENST00000399275 KDM3AQ9Y4C1 1321 aa10.27□□□□□ -0.76
SMAD9-203ENST00000399275 MFN2O95140 757 aa10.27□□□□□ -0.76
SMAD9-203ENST00000399275 BCRP11274 1271 aa10.27□□□□□ -0.76
SMAD9-203ENST00000399275 ADCY8P40145 1251 aa10.27□□□□□ -0.76
SMAD9-203ENST00000399275 TUBA4AP68366 448 aa10.27□□□□□ -0.76
SMAD9-203ENST00000399275 CNGA3Q16281 694 aa10.27□□□□□ -0.76
SMAD9-203ENST00000399275 NOP56O00567 594 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 STRNO43815 780 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 PLCG2P16885 1265 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 STAT1P42224 750 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 ROR2Q01974 943 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 HERC4Q5GLZ8 1057 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 RSBN1Q5VWQ0 802 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 GABPB2Q8TAK5 448 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 AK8Q96MA6 479 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 NFU1Q9UMS0 254 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 ATP10DQ9P241 1426 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 PLEKHG1Q9ULL1 1385 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 LZTS3O60299 673 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 SERPINB2P05120 415 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 HSPA8P11142 646 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 POLR2FP61218 127 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 OLR1P78380 273 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 TAF12Q16514 161 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 RASGRP2Q7LDG7 609 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 EXOC8Q8IYI6 725 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 U2AF1L4Q8WU68 220 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 MOV10L1Q9BXT6 1211 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 FUT8Q9BYC5 575 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms