RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 NIFKQ9BYG3 293 aaKnown RBP13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 RAB34Q9BZG1 259 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TRPC6Q9Y210 931 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 ATP11BQ9Y2G3 1177 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 TNRC18O15417 2968 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 KAT6AQ92794 2004 aa13.9□□□□□ -0.18
HLA-DQB1-203ENST00000399082 NRCAMQ92823 1304 aa13.9□□□□□ -0.19
HLA-DQB1-203ENST00000399082 COL1A2P08123 1366 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 C17orf102A2RUQ5 167 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CUTAO60888 179 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 C22orf31O95567 290 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 YWHABP31946 246 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 KARSQ15046 597 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TRIM71Q2Q1W2 868 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 KRT79Q5XKE5 535 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 HAUS3Q68CZ6 603 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 RUFY4Q6ZNE9 571 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SH3RF1Q7Z6J0 888 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CABP7Q86V35 215 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 LINC01465Q8N7H1 131 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PIGOQ8TEQ8 1089 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SYMPKQ92797 1274 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 FAM167AQ96KS9 214 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SEZ6LQ9BYH1 1024 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CCSER1Q9C0I3 900 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PDLIM7Q9NR12 457 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 DDX19AQ9NUU7 478 aaKnown RBP13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SEPT9Q9UHD8 586 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SIP14410 1827 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 LTBP2Q14767 1821 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 DDX11L8A8MPP1 907 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CYP2C9P11712 490 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 MUTP22033 750 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 RARRES1P49788 294 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 IGBP1P78318 339 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 MTERF2Q49AM1 385 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 ZNF484Q5JVG2 852 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SERINC5Q86VE9 423 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PLIN2Q99541 437 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SCAND2PQ9GZW5 306 aaPredicted RBP13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 MROH7Q68CQ1 1323 aa13.88□□□□□ -0.19
HLA-DQB1-203ENST00000399082 EVPLQ92817 2033 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 RRN3P2A6NIE6 340 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 E9PMD0 336 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 DKC1O60832 514 aaKnown RBP eCLIP13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PLCG1P19174 1290 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 KLRC1P26715 233 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 ME1P48163 572 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PTGISQ16647 500 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TRAF7Q6Q0C0 670 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 MTHFD1LQ6UB35 978 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 C7orf61Q8IZ16 206 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 HTATIP2Q9BUP3 242 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 XPNPEP1Q9NQW7 623 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CYP26B1Q9NR63 512 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 NRBP2Q9NSY0 501 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 BLOC1S4Q9NUP1 217 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TUBE1Q9UJT0 475 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 DBR1Q9UK59 544 aaKnown RBP13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 STK24Q9Y6E0 443 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 UMODL1Q5DID0 1318 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 KDM3AQ9Y4C1 1321 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TANC1Q9C0D5 1861 aa13.87□□□□□ -0.19
HLA-DQB1-203ENST00000399082 LOXHD1Q8IVV2 1947 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 SLC26A4O43511 780 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CLTBP09497 229 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 ITGB8P26012 769 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 UBA7P41226 1012 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 RBL2Q08999 1139 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PTK7Q13308 1070 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 DRP2Q13474 957 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 NAALADL2Q58DX5 795 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 RESP18Q5W5W9 173 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CLEC17AQ6ZS10 378 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 NACC1Q96RE7 527 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 NOC4LQ9BVI4 516 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 DHX33Q9H6R0 707 aaKnown RBP13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 PCDHA2Q9Y5H9 948 aa13.86□□□□□ -0.19
HLA-DQB1-203ENST00000399082 DCDC2CA8MYV0 355 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 KIAA0355O15063 1070 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 TLR3O15455 904 aaKnown RBP13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 EYA4O95677 639 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 XRCC6P12956 609 aaKnown RBP eCLIP13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 CLCN3P51790 818 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 E2F4Q16254 413 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 XKR9Q5GH70 373 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 ADALQ6DHV7 355 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 LRRC71Q8N4P6 559 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 BHMT2Q9H2M3 363 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 GOLPH3LQ9H4A5 285 aa13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 BMP2KQ9NSY1 1161 aaPredicted RBP13.85□□□□□ -0.19
HLA-DQB1-203ENST00000399082 HPSEQ9Y251 543 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms