RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 GIMAP7Q8NHV1 300 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 RBM46Q8TBY0 533 aaKnown RBP14.45□□□□□ -0.1
TOP3B-202ENST00000398793 TUBE1Q9UJT0 475 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 PPP1R3GB7ZBB8 358 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 hCG_1984214I3L0E3 225 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 TBCAO75347 108 aaKnown RBP14.45□□□□□ -0.1
TOP3B-202ENST00000398793 FAM13AO94988 1023 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 CYP2J2P51589 502 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 TMEM62Q0P6H9 643 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 SEZ6Q53EL9 994 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 LBX2Q6XYB7 198 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 ZNF713Q8N859 430 aaPredicted RBP14.45□□□□□ -0.1
TOP3B-202ENST00000398793 KIAA0895Q8NCT3 520 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 ERMNQ8TAM6 284 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 TMEM143Q96AN5 459 aa14.45□□□□□ -0.1
TOP3B-202ENST00000398793 SBF1O95248 1867 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 SFPQP23246 707 aaKnown RBP eCLIP14.44□□□□□ -0.1
TOP3B-202ENST00000398793 TBC1D8BQ0IIM8 1120 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 DCAF17Q5H9S7 520 aaPredicted RBP14.44□□□□□ -0.1
TOP3B-202ENST00000398793 KANK3Q6NY19 840 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 RBM43Q6ZSC3 357 aaKnown RBP14.44□□□□□ -0.1
TOP3B-202ENST00000398793 KAT2BQ92831 832 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 SOWAHBA6NEL2 793 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 IGF2BP3O00425 579 aaKnown RBP eCLIP14.44□□□□□ -0.1
TOP3B-202ENST00000398793 RPS6KA5O75582 802 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 ARIH2O95376 493 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 GGPS1O95749 300 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 ERVK-9P63128 1117 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 ERVK-24P63145 666 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 ARSHQ5FYA8 562 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 SLFN12Q8IYM2 578 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 LRRC71Q8N4P6 559 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 METTL13Q8N6R0 699 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 AGTPBP1Q9UPW5 1226 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 DOCK3Q8IZD9 2030 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 PHLPP2Q6ZVD8 1323 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 NOP56O00567 594 aaKnown RBP14.44□□□□□ -0.1
TOP3B-202ENST00000398793 ADORA2AP29274 412 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 HNRNPH1P31943 449 aaKnown RBP14.44□□□□□ -0.1
TOP3B-202ENST00000398793 COASYQ13057 564 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 HSDL1Q3SXM5 330 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 ODR4Q5SWX8 454 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 FBXW10Q5XX13 1052 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 CEP170P1Q96L14 293 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 ARHGAP39Q9C0H5 1083 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 CCSER1Q9C0I3 900 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 EHMT1Q9H9B1 1298 aa14.44□□□□□ -0.1
TOP3B-202ENST00000398793 DLEC1Q9Y238 1755 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 B4DLN1 442 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 CYP11B2P19099 503 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 OSBPP22059 807 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 PEX3P56589 373 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 SEMA3FQ13275 785 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 CCL14Q16627 93 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 GBP6Q6ZN66 633 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 SYCP3Q8IZU3 236 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 A0A0G2JLL6 359 aaPredicted RBP14.43□□□□□ -0.1
TOP3B-202ENST00000398793 GCFC2P16383 781 aaKnown RBP14.43□□□□□ -0.1
TOP3B-202ENST00000398793 USP8P40818 1118 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 SPIRE1Q08AE8 756 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 FAM26FQ5R3K3 315 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 HAUS3Q68CZ6 603 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 PRRT2Q7Z6L0 340 aaPredicted RBP14.43□□□□□ -0.1
TOP3B-202ENST00000398793 CCDC60Q8IWA6 550 aaPredicted RBP14.43□□□□□ -0.1
TOP3B-202ENST00000398793 ZSWIM2Q8NEG5 633 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 CCDC47Q96A33 483 aaKnown RBP14.43□□□□□ -0.1
TOP3B-202ENST00000398793 JPH2Q9BR39 696 aaPredicted RBP14.43□□□□□ -0.1
TOP3B-202ENST00000398793 SLC24A3Q9HC58 644 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 VAV3Q9UKW4 847 aa14.43□□□□□ -0.1
TOP3B-202ENST00000398793 KLRC4O43908 158 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 CCND2P30279 289 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 ADCYAP1R1P41586 468 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 MATR3P43243 847 aaKnown RBP eCLIP14.42□□□□□ -0.19e-6■■□□□ 12
TOP3B-202ENST00000398793 UBXN1Q04323 297 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 MAP9Q49MG5 647 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 GPAT2Q6NUI2 795 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 DNAAF5Q86Y56 855 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 CCDC102AQ96A19 550 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 DESI2Q9BSY9 194 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 HSD3B7Q9H2F3 369 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 ZSWIM4Q9H7M6 989 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 FAM207AQ9NSI2 230 aaPredicted RBP14.42□□□□□ -0.1
TOP3B-202ENST00000398793 KBTBD4Q9NVX7 518 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 TFR2Q9UP52 801 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 PSMA7O14818 248 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 SLC16A4O15374 487 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 TRPA1O75762 1119 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 PSMD10O75832 226 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
TOP3B-202ENST00000398793 AMPD3Q01432 767 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 REPS2Q8NFH8 660 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 ZC3H15Q8WU90 426 aaKnown RBP14.42□□□□□ -0.1
TOP3B-202ENST00000398793 AGO4Q9HCK5 861 aaKnown RBP14.42□□□□□ -0.1
TOP3B-202ENST00000398793 PPP2R3BQ9Y5P8 575 aa14.42□□□□□ -0.1
TOP3B-202ENST00000398793 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.41□□□□□ -0.1
TOP3B-202ENST00000398793 NEBLO76041 1014 aa14.41□□□□□ -0.1
TOP3B-202ENST00000398793 CAVIN2O95810 425 aa14.41□□□□□ -0.1
TOP3B-202ENST00000398793 TUBB4AP04350 444 aa14.41□□□□□ -0.1
TOP3B-202ENST00000398793 ZNF286BP0CG31 522 aa14.41□□□□□ -0.1
TOP3B-202ENST00000398793 CALRP27797 417 aaKnown RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms