RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ZBTB39O15060 712 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 PPP1R12BO60237 982 aaPredicted RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 FAM228BP0C875 321 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 NMT1P30419 496 aaKnown RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 PTGER2P43116 358 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 MAP3K10Q02779 954 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 ENOX2Q16206 610 aaKnown RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 NFIL3Q16649 462 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 CCDC181Q5TID7 509 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 DPY19L2P1Q6NXN4 242 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 GBP6Q6ZN66 633 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 STXBP4Q6ZWJ1 553 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 ZFP91Q96JP5 570 aaPredicted RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 ZCCHC17Q9NP64 241 aaKnown RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 PGAP2Q9UHJ9 254 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 FBXL5Q9UKA1 691 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 ZHX1Q9UKY1 873 aaPredicted RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 PCDHB13Q9Y5F0 798 aa15.18■□□□□ 0.02
PRAME-202ENST00000398743 BZW2Q9Y6E2 419 aaKnown RBP15.18■□□□□ 0.02
PRAME-202ENST00000398743 H3BQF6 201 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 POLD1P28340 1107 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 HSD17B4P51659 736 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 ZNF131P52739 623 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 NAB2Q15742 525 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 NBPF9Q3BBW0 867 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 B3GNT9Q6UX72 402 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 FAM178BQ8IXR5 827 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 MMGT1Q8N4V1 131 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 ZBED3Q96IU2 234 aaPredicted RBP15.17■□□□□ 0.02
PRAME-202ENST00000398743 AGBL1Q96MI9 1066 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 RIT2Q99578 217 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 MXRA8Q9BRK3 442 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 LXNQ9BS40 222 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 TLR10Q9BXR5 811 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 ZNF341Q9BYN7 854 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 ACBD3Q9H3P7 528 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 GCNT4Q9P109 453 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 WRAP73Q9P2S5 460 aaPredicted RBP15.17■□□□□ 0.02
PRAME-202ENST00000398743 GTPBP10A4D1E9 387 aaKnown RBP15.17■□□□□ 0.02
PRAME-202ENST00000398743 NCK2O43639 380 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 CXCR5P32302 372 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 PSMC2P35998 433 aaKnown RBP15.17■□□□□ 0.02
PRAME-202ENST00000398743 PAFAH1B1P43034 410 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 KIAA0753Q2KHM9 967 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 ZC2HC1CQ53FD0 456 aaPredicted RBP15.17■□□□□ 0.02
PRAME-202ENST00000398743 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 IRF2BP2Q7Z5L9 587 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 FAM186BQ8IYM0 893 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 SPATA4Q8NEY3 305 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 NEK9Q8TD19 979 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 PSMB7Q99436 277 aa15.17■□□□□ 0.02
PRAME-202ENST00000398743 KLRC1P26715 233 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 PTK2Q05397 1052 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 CXCL9Q07325 125 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 HS2ST1Q7LGA3 356 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 ZNF720Q7Z2F6 126 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 PKNOX2Q96KN3 472 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 FIZ1Q96SL8 496 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 MYOZ2Q9NPC6 264 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 SMCHD1A6NHR9 2005 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 ZNF536O15090 1300 aa15.16■□□□□ 0.02
PRAME-202ENST00000398743 RBBP6Q7Z6E9 1792 aaKnown RBP15.15■□□□□ 0.02
PRAME-202ENST00000398743 LRRIQ3A6PVS8 624 aaPredicted RBP15.15■□□□□ 0.02
PRAME-202ENST00000398743 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
PRAME-202ENST00000398743 PALMO75781 387 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 BCRP11274 1271 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 ITGB5P18084 799 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 GUCY2CP25092 1073 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 INPP5BP32019 993 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 ODR4Q5SWX8 454 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 PRPF38AQ8NAV1 312 aaKnown RBP15.15■□□□□ 0.02
PRAME-202ENST00000398743 HOOK2Q96ED9 719 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 BORCS6Q96GS4 357 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 MKNK1Q9BUB5 465 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 VIPAS39Q9H9C1 493 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 ARHGEF35A5YM69 484 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 CYP2C19P33261 490 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 PRKCIP41743 596 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 TNIP1Q15025 636 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 ZNF571Q7Z3V5 609 aaPredicted RBP15.15■□□□□ 0.02
PRAME-202ENST00000398743 MCF2L2Q86YR7 1114 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 BANK1Q8NDB2 785 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
PRAME-202ENST00000398743 RUBCNQ92622 972 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 LPAR1Q92633 364 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 SIX2Q9NPC8 291 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 RNF14Q9UBS8 474 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 RPTORQ8N122 1335 aa15.15■□□□□ 0.02
PRAME-202ENST00000398743 BTNL10A8MVZ5 291 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 PHF20L1A8MW92 1017 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 DDX39AO00148 427 aaKnown RBP15.14■□□□□ 0.01
PRAME-202ENST00000398743 NFIBO00712 420 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 ZMYND10O75800 440 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 ANXA13P27216 316 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 TNNT3P45378 269 aaPredicted RBP15.14■□□□□ 0.01
PRAME-202ENST00000398743 CFAP221Q4G0U5 840 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 HSP90B2PQ58FF3 399 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 PACSIN1Q9BY11 444 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms