RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 COL1A2P08123 1366 aa15.18■□□□□ 0.02
VCX3A-202ENST00000398729 MYH9P35579 1960 aaKnown RBP15.17■□□□□ 0.02
VCX3A-202ENST00000398729 COL4A4P53420 1690 aaPredicted RBP15.17■□□□□ 0.02
VCX3A-202ENST00000398729 PRR33A8MZF0 331 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 MSH4O15457 936 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 PFKFB2O60825 505 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 UPP2O95045 317 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 IL9P15248 144 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 XBP1P17861 261 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 KCNA5P22460 613 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 KLRC1P26715 233 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 AK2P54819 239 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 ZNF484Q5JVG2 852 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 TSHZ1Q6ZSZ6 1077 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 NME8Q8N427 588 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 BBXQ8WY36 941 aaPredicted RBP15.17■□□□□ 0.02
VCX3A-202ENST00000398729 AIFM3Q96NN9 605 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 YME1L1Q96TA2 773 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 MAFBQ9Y5Q3 323 aaPredicted RBP15.17■□□□□ 0.02
VCX3A-202ENST00000398729 SQORQ9Y6N5 450 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 STK36Q9NRP7 1315 aa15.17■□□□□ 0.02
VCX3A-202ENST00000398729 GRXCR2A6NFK2 248 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 WDR64B1ANS9 1081 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 M0R2N6 131 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 EDIL3O43854 480 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 GAS7O60861 476 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 TMEM62Q0P6H9 643 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 KRT25Q7Z3Z0 450 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 NEK9Q8TD19 979 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 RIT2Q99578 217 aa15.16■□□□□ 0.02
VCX3A-202ENST00000398729 CELF4Q9BZC1 486 aaKnown RBP15.16■□□□□ 0.02
VCX3A-202ENST00000398729 ATP4AP20648 1035 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 SFNP31947 248 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 NONOQ15233 471 aaKnown RBP eCLIP15.15■□□□□ 0.02
VCX3A-202ENST00000398729 NPY5RQ15761 445 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 Q4G0T1 1027 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 LRCH2Q5VUJ6 765 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 PTCRAQ6ISU1 281 aaPredicted RBP15.15■□□□□ 0.02
VCX3A-202ENST00000398729 SP7Q8TDD2 431 aaPredicted RBP15.15■□□□□ 0.02
VCX3A-202ENST00000398729 SLC5A5Q92911 643 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 IL17RAQ96F46 866 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 FAM167AQ96KS9 214 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 TEKT3Q9BXF9 490 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 AGO3Q9H9G7 860 aaKnown RBP15.15■□□□□ 0.02
VCX3A-202ENST00000398729 DISC1Q9NRI5 854 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 GABBR1Q9UBS5 961 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 KCNJ14Q9UNX9 436 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 CEP131Q9UPN4 1083 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 IGSF9BQ9UPX0 1349 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 KDM3AQ9Y4C1 1321 aa15.15■□□□□ 0.02
VCX3A-202ENST00000398729 CYP3A7-CYP3A51PA0A087WV96 503 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 CCDC194A0A1B0GVG4 234 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 ENPP3O14638 875 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 TDP2O95551 362 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 CYP3A7P24462 503 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 CD52P31358 61 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 JAK3P52333 1124 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 MOXD1Q6UVY6 613 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 TRMT1LQ7Z2T5 733 aaKnown RBP15.14■□□□□ 0.01
VCX3A-202ENST00000398729 FBXO22Q8NEZ5 403 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 WASF1Q92558 559 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 SAMD11Q96NU1 681 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 PHF20Q9BVI0 1012 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 FTHL17Q9BXU8 183 aa15.14■□□□□ 0.01
VCX3A-202ENST00000398729 ORC3Q9UBD5 711 aaPredicted RBP15.14■□□□□ 0.01
VCX3A-202ENST00000398729 WDR81Q562E7 1941 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 LOXHD1Q8IVV2 1947 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 ZBTB42B2RXF5 422 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 H3BQ06 376 aaPredicted RBP15.13■□□□□ 0.01
VCX3A-202ENST00000398729 CHMP2AO43633 222 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 SSTR3P32745 418 aaPredicted RBP15.13■□□□□ 0.01
VCX3A-202ENST00000398729 NEK4P51957 841 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 PAK2Q13177 524 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 INF2Q27J81 1249 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 KIAA0319LQ8IZA0 1049 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 RDM1Q8NG50 284 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 UNC45AQ9H3U1 944 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 NRBP2Q9NSY0 501 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 PADI3Q9ULW8 664 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 GINS2Q9Y248 185 aa15.13■□□□□ 0.01
VCX3A-202ENST00000398729 COL4A6Q14031 1691 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 EVPLQ92817 2033 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 MAGEB2O15479 319 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 PSMD10O75832 226 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 CTDNEP1O95476 244 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 C22orf31O95567 290 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 ALADP13716 330 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 COL19A1Q14993 1142 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 ME3Q16798 604 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 LETM2Q2VYF4 491 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 ODR4Q5SWX8 454 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 FAM43BQ6ZT52 329 aaPredicted RBP15.12■□□□□ 0.01
VCX3A-202ENST00000398729 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 NEK8Q86SG6 692 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 METTL13Q8N6R0 699 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 NECAB1Q8N987 351 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 GTF3C6Q969F1 213 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 GJA10Q969M2 543 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 MRPL38Q96DV4 380 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms