RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF668Q96K58 619 aaPredicted RBP15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 SPATA17Q96L03 361 aa15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
PCDHA11-201ENST00000398640 CYP2B6P20813 491 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 CLNS1AP54105 237 aaKnown RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 RABL6Q3YEC7 729 aaPredicted RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 FAM186BQ8IYM0 893 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 OLA1Q9NTK5 396 aaKnown RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 KLHL14Q9P2G3 628 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 PRPF3O43395 683 aaKnown RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 CASP14P31944 242 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 ABCD1P33897 745 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 JAK3P52333 1124 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 MTMR1Q13613 665 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 TWF2Q6IBS0 349 aaKnown RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 LPAR1Q92633 364 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 CDKL2Q92772 493 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 SCAF8Q9UPN6 1271 aaKnown RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 RNF219Q5W0B1 726 aaPredicted RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 NRBP1Q9UHY1 535 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 CTNND1O60716 968 aaKnown RBP15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 GPRC5AQ8NFJ5 357 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 OR6B3Q8NGW1 331 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 TCP11Q8WWU5 503 aa15.38■□□□□ 0.05
PCDHA11-201ENST00000398640 WDR64B1ANS9 1081 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 PDE1CQ14123 709 aaPredicted RBP15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 SRGAP2BP0DMP2 458 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 SESN3P58005 492 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 PPP2R3BQ9Y5P8 575 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 FLT1P17948 1338 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 BCL9O00512 1426 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 GUCY2DQ02846 1103 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 TKFCQ3LXA3 575 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 DNAAF3Q8N9W5 541 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 OR6J1Q8NGC5 347 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 MSTO1Q9BUK6 570 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 PCDHA6Q9UN73 950 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 PCDHA8Q9Y5H6 950 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 KRT10P13645 584 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 ATG9AQ7Z3C6 839 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 SCN4BQ8IWT1 228 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 LRRC8AQ8IWT6 810 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 TRIML1Q8N9V2 468 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 DACT3Q96B18 629 aaPredicted RBP15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 UBE2TQ9NPD8 197 aaPredicted RBP15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 CEMIPQ8WUJ3 1361 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 ZNF233A6NK53 670 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 AKR1B1P15121 316 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 TRAPPC10P48553 1259 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 RWDD4Q6NW29 188 aaKnown RBP15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 BAG5Q9UL15 447 aa15.37■□□□□ 0.05
PCDHA11-201ENST00000398640 INHBAP08476 426 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 ARHGAP25P42331 645 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 ARHGAP4P98171 946 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 RBL2Q08999 1139 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 THNSL1Q8IYQ7 743 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 GPC2Q8N158 579 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 URGCPQ8TCY9 931 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 DDX27Q96GQ7 796 aaKnown RBP15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 BPIFB4P59827 614 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 PSMD2Q13200 908 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 THEM5Q8N1Q8 247 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 MB21D1Q8N884 522 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 HOMER3Q9NSC5 361 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 GDAQ9Y2T3 454 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 EPN1Q9Y6I3 576 aaPredicted RBP15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 GFPT2O94808 682 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 GAP43P17677 238 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 SLFNL1Q499Z3 407 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 POLLQ9UGP5 575 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 KIF20BQ96Q89 1820 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 ZMYND10O75800 440 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 KRT1P04264 644 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 PPP4R4Q6NUP7 873 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 TDRD7Q8NHU6 1098 aaKnown RBP15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 RASSF2P50749 326 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 HDLBPQ00341 1268 aaKnown RBP15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 FOXD4Q12950 439 aaPredicted RBP15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 RNF217Q8TC41 542 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 MAGOHBQ96A72 148 aaKnown RBP15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 SPATA33Q96N06 139 aa15.36■□□□□ 0.05
PCDHA11-201ENST00000398640 PPFIA4O75335 1185 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 NR5A1Q13285 461 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 IQCB1Q15051 598 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 CDO1Q16878 200 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 TRIM68Q6AZZ1 485 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 FAM133AQ8N9E0 248 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 KCTD6Q8NC69 237 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 MUM1Q2TAK8 710 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 FBXO33Q7Z6M2 555 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 RPGRIP1Q96KN7 1286 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 CALN1Q9BXU9 219 aa15.35■□□□□ 0.05
PCDHA11-201ENST00000398640 FOXP1Q9H334 677 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms