RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SARSP49591 514 aaKnown RBP13.72□□□□□ -0.21
TFF3-202ENST00000398431 SLC26A2P50443 739 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 NFX1Q12986 1120 aaKnown RBP13.72□□□□□ -0.21
TFF3-202ENST00000398431 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 ADCK5Q3MIX3 580 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 FAM102BQ5T8I3 360 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 NIPA1Q7RTP0 329 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 CCDC60Q8IWA6 550 aaPredicted RBP13.72□□□□□ -0.21
TFF3-202ENST00000398431 ATP8B4Q8TF62 1192 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 RGS18Q9NS28 235 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 RBM28Q9NW13 759 aaKnown RBP13.72□□□□□ -0.21
TFF3-202ENST00000398431 BARHL2Q9NY43 387 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 ZNF318Q5VUA4 2279 aa13.72□□□□□ -0.21
TFF3-202ENST00000398431 PIEZO1Q92508 2521 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 IGLV3-22A0A075B6J6 115 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 C9IYK1 514 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 DDX39AO00148 427 aaKnown RBP13.71□□□□□ -0.21
TFF3-202ENST00000398431 PPFIA3O75145 1194 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 NRIP1P48552 1158 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 ADCY7P51828 1080 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 FAM189BP81408 668 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 COASYQ13057 564 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 RTN1Q16799 776 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 SWSAP1Q6NVH7 229 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 PPP1R18Q6NYC8 613 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 DHX32Q7L7V1 743 aaKnown RBP13.71□□□□□ -0.21
TFF3-202ENST00000398431 RBM23Q86U06 439 aaKnown RBP13.71□□□□□ -0.21
TFF3-202ENST00000398431 SKAP1Q86WV1 359 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 ADAM2Q99965 735 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 ST3GAL5Q9UNP4 418 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 PCDHB7Q9Y5E2 793 aa13.71□□□□□ -0.21
TFF3-202ENST00000398431 LOC730098B7Z3J9 87 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 ZBTB43O43298 467 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 CYP3A4P08684 503 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 NDUFV1P49821 464 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 RBM10P98175 930 aaKnown RBP13.7□□□□□ -0.22
TFF3-202ENST00000398431 NHLH1Q02575 133 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 AP3B2Q13367 1082 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 DSC3Q14574 896 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 ZNF484Q5JVG2 852 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 JAKMIP3Q5VZ66 844 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 FAM43BQ6ZT52 329 aaPredicted RBP13.7□□□□□ -0.22
TFF3-202ENST00000398431 PLA2G4DQ86XP0 818 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 VN1R2Q8NFZ6 395 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 EDAQ92838 391 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 POP1Q99575 1024 aaKnown RBP13.7□□□□□ -0.22
TFF3-202ENST00000398431 KCNH6Q9H252 994 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 ZNF302Q9NR11 478 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 LRFN2Q9ULH4 789 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 BARX2Q9UMQ3 279 aaPredicted RBP13.7□□□□□ -0.22
TFF3-202ENST00000398431 GINS2Q9Y248 185 aa13.7□□□□□ -0.22
TFF3-202ENST00000398431 MAFBQ9Y5Q3 323 aaPredicted RBP13.7□□□□□ -0.22
TFF3-202ENST00000398431 hCG_1984214I3L0E3 225 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 BACH1O14867 736 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 PER2O15055 1255 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 EDIL3O43854 480 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 GPR32O75388 356 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 C22orf31O95567 290 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 ADD1P35611 737 aaKnown RBP13.69□□□□□ -0.22
TFF3-202ENST00000398431 ZNF76P36508 570 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 ERVFC1P60507 584 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 KCNC3Q14003 757 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 CBX2Q14781 532 aaPredicted RBP13.69□□□□□ -0.22
TFF3-202ENST00000398431 FAM160B1Q5W0V3 765 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 PDXDC2PQ6P474 469 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 SLC24A5Q71RS6 500 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 ZNF713Q8N859 430 aaPredicted RBP13.69□□□□□ -0.22
TFF3-202ENST00000398431 CWH43Q9H720 699 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 TLE6Q9H808 572 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 C1orf112Q9NSG2 853 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 TYW1Q9NV66 732 aaKnown RBP13.69□□□□□ -0.22
TFF3-202ENST00000398431 TRIOO75962 3097 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 COL1A2P08123 1366 aa13.69□□□□□ -0.22
TFF3-202ENST00000398431 KLF18A0A0U1RQI7 1052 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 TBKBP1A7MCY6 615 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 IPO5O00410 1097 aaKnown RBP13.68□□□□□ -0.22
TFF3-202ENST00000398431 FSCN2O14926 492 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 GPR182O15218 404 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 IBSPP21815 317 aaPredicted RBP13.68□□□□□ -0.22
TFF3-202ENST00000398431 CRYBB1P53674 252 aaPredicted RBP13.68□□□□□ -0.22
TFF3-202ENST00000398431 UBE3AQ05086 875 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 PKN1Q16512 942 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 PFKFB3Q16875 520 aaPredicted RBP13.68□□□□□ -0.22
TFF3-202ENST00000398431 KIZQ2M2Z5 673 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 RNF20Q5VTR2 975 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 LRRC55Q6ZSA7 311 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 BMP8AQ7Z5Y6 402 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 FAM228AQ86W67 206 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 PPP2R3CQ969Q6 453 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 PPP1R16BQ96T49 567 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 GLT8D2Q9H1C3 349 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 RNF19AQ9NV58 838 aa13.68□□□□□ -0.22
TFF3-202ENST00000398431 USP15Q9Y4E8 981 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms