RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 MGAT3Q09327 533 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 MBTPS1Q14703 1052 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 TARBP2Q15633 366 aaKnown RBP16.02■□□□□ 0.16
HDDC2-202ENST00000398153 UGCGQ16739 394 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 TRAPPC12Q8WVT3 735 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 SEPT8Q92599 483 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 SLC9A7Q96T83 725 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 HSD17B14Q9BPX1 270 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
HDDC2-202ENST00000398153 LAMA3Q16787 3333 aa16.02■□□□□ 0.15
HDDC2-202ENST00000398153 SOX1O00570 391 aaPredicted RBP16.01■□□□□ 0.15
HDDC2-202ENST00000398153 STBD1O95210 358 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 LYPLA2O95372 231 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 XRCC6P12956 609 aaKnown RBP eCLIP16.01■□□□□ 0.152e-8■□□□□ 10.1
HDDC2-202ENST00000398153 PRPHP41219 470 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 KCNJ6P48051 423 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 TBC1D8BQ0IIM8 1120 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 PDIA5Q14554 519 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 ZNF174Q15697 407 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 TMEM266Q2M3C6 531 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 ODR4Q5SWX8 454 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 NCAPH2Q6IBW4 605 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 BRAPQ7Z569 592 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 HSCBQ8IWL3 235 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 KIAA0319LQ8IZA0 1049 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 RAB34Q9BZG1 259 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 FAM49AQ9H0Q0 323 aaPredicted RBP16.01■□□□□ 0.15
HDDC2-202ENST00000398153 TMEM60Q9H2L4 133 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 CXXC1Q9P0U4 656 aaPredicted RBP16.01■□□□□ 0.15
HDDC2-202ENST00000398153 TRPV2Q9Y5S1 764 aa16.01■□□□□ 0.15
HDDC2-202ENST00000398153 TET1Q8NFU7 2136 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 ZBBXA8MT70 800 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 SLITRK3O94933 977 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 CTSHP09668 335 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 ATP2A2P16615 1042 aaKnown RBP16■□□□□ 0.15
HDDC2-202ENST00000398153 MUTP22033 750 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 DNM2P50570 870 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 TOB1P50616 345 aaPredicted RBP16■□□□□ 0.15
HDDC2-202ENST00000398153 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
HDDC2-202ENST00000398153 RAB30Q15771 203 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 TSHZ1Q6ZSZ6 1077 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 ANO5Q75V66 913 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 LINC01465Q8N7H1 131 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 C4orf32Q8N8J7 132 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 DBF4BQ8NFT6 615 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 ERMNQ8TAM6 284 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 MAP7D2Q96T17 732 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 EIF2AK1Q9BQI3 630 aaKnown RBP16■□□□□ 0.15
HDDC2-202ENST00000398153 LXNQ9BS40 222 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 IFIH1Q9BYX4 1025 aaKnown RBP16■□□□□ 0.15
HDDC2-202ENST00000398153 CELF4Q9BZC1 486 aaKnown RBP16■□□□□ 0.15
HDDC2-202ENST00000398153 SEPT9Q9UHD8 586 aaPredicted RBP16■□□□□ 0.15
HDDC2-202ENST00000398153 CDY2AQ9Y6F7 541 aa16■□□□□ 0.15
HDDC2-202ENST00000398153 IGKV6-21A0A0C4DH24 114 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 DDX11L8A8MPP1 907 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 GAS2O43903 313 aaKnown RBP15.99■□□□□ 0.15
HDDC2-202ENST00000398153 MAFO75444 373 aaPredicted RBP15.99■□□□□ 0.15
HDDC2-202ENST00000398153 PTGDRQ13258 359 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 FBXO47Q5MNV8 452 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 EFCAB12Q6NXP0 572 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 TRMT1LQ7Z2T5 733 aaKnown RBP15.99■□□□□ 0.15
HDDC2-202ENST00000398153 METTL13Q8N6R0 699 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 LRCH3Q96II8 777 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 CEP89Q96ST8 783 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 FTHL17Q9BXU8 183 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 TUFT1Q9NNX1 390 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 CYP26B1Q9NR63 512 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.99■□□□□ 0.15
HDDC2-202ENST00000398153 EVPLQ92817 2033 aa15.99■□□□□ 0.15
HDDC2-202ENST00000398153 BMP15O95972 392 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
HDDC2-202ENST00000398153 RFC5P40937 340 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 TECP42680 631 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 CRYBB1P53674 252 aaPredicted RBP15.98■□□□□ 0.15
HDDC2-202ENST00000398153 WDR5P61964 334 aaKnown RBP15.98■□□□□ 0.15
HDDC2-202ENST00000398153 ARL6IP4Q66PJ3 421 aaKnown RBP15.98■□□□□ 0.15
HDDC2-202ENST00000398153 HAUS3Q68CZ6 603 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 TPH2Q8IWU9 490 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 SLC7A3Q8WY07 619 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 DYDC2Q96IM9 177 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 POLR3CQ9BUI4 534 aaPredicted RBP15.98■□□□□ 0.15
HDDC2-202ENST00000398153 ANKEF1Q9NU02 776 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 RGL1Q9NZL6 768 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 MSRAQ9UJ68 235 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 PCDHB6Q9Y5E3 794 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 PCDHA11Q9Y5I1 949 aa15.98■□□□□ 0.15
HDDC2-202ENST00000398153 SIP14410 1827 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 SYT1P21579 422 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 RPA1P27694 616 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 MKRN4PQ13434 485 aaPredicted RBP15.97■□□□□ 0.15
HDDC2-202ENST00000398153 LPIN1Q14693 890 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 MTERF2Q49AM1 385 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 KCTD17Q8N5Z5 321 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 IGSF22Q8N9C0 903 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 ZBTB10Q96DT7 871 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
HDDC2-202ENST00000398153 POTEMA6NI47 508 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms