RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 HERC6Q8IVU3 1022 aa18.81■□□□□ 0.6
APTR-201ENST00000398043 CKAP2LQ8IYA6 745 aa18.81■□□□□ 0.6
APTR-201ENST00000398043 NME8Q8N427 588 aa18.81■□□□□ 0.6
APTR-201ENST00000398043 MTMR9Q96QG7 549 aa18.81■□□□□ 0.6
APTR-201ENST00000398043 ZNF576Q9H609 170 aa18.81■□□□□ 0.6
APTR-201ENST00000398043 SQORQ9Y6N5 450 aa18.81■□□□□ 0.6
APTR-201ENST00000398043 TRANK1O15050 2925 aa18.8■□□□□ 0.6
APTR-201ENST00000398043 KIF28PB7ZC32 967 aa18.8■□□□□ 0.6
APTR-201ENST00000398043 U2AF2P26368 475 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■■■□□ 15.6
APTR-201ENST00000398043 SAFBQ15424 915 aaKnown RBP eCLIP18.8■□□□□ 0.6
APTR-201ENST00000398043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.8■□□□□ 0.6
APTR-201ENST00000398043 TMCO2Q7Z6W1 182 aaPredicted RBP18.8■□□□□ 0.6
APTR-201ENST00000398043 SLFN12Q8IYM2 578 aa18.8■□□□□ 0.6
APTR-201ENST00000398043 FAM184AQ8NB25 1140 aa18.8■□□□□ 0.6
APTR-201ENST00000398043 SEPT8Q92599 483 aa18.8■□□□□ 0.6
APTR-201ENST00000398043 CDX2Q99626 313 aaPredicted RBP18.8■□□□□ 0.6
APTR-201ENST00000398043 NIFKQ9BYG3 293 aaKnown RBP18.8■□□□□ 0.6
APTR-201ENST00000398043 NKX2-4Q9H2Z4 354 aa18.8■□□□□ 0.6
APTR-201ENST00000398043 MSRAQ9UJ68 235 aa18.8■□□□□ 0.6
APTR-201ENST00000398043 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.79■□□□□ 0.6
APTR-201ENST00000398043 GHRP10912 638 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 KCNJ6P48051 423 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 GRIN2CQ14957 1233 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 IER5Q5VY09 327 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 TRMT1LQ7Z2T5 733 aaKnown RBP18.79■□□□□ 0.6
APTR-201ENST00000398043 APBB2Q92870 758 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 IFIH1Q9BYX4 1025 aaKnown RBP18.79■□□□□ 0.6
APTR-201ENST00000398043 CELF4Q9BZC1 486 aaKnown RBP18.79■□□□□ 0.6
APTR-201ENST00000398043 TMEM60Q9H2L4 133 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 AGO3Q9H9G7 860 aaKnown RBP18.79■□□□□ 0.6
APTR-201ENST00000398043 NRBP2Q9NSY0 501 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 WRAP73Q9P2S5 460 aaPredicted RBP18.79■□□□□ 0.6
APTR-201ENST00000398043 CEP131Q9UPN4 1083 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 STXBP5LQ9Y2K9 1186 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 TRPV2Q9Y5S1 764 aa18.79■□□□□ 0.6
APTR-201ENST00000398043 RALGAPA2Q2PPJ7 1873 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 MAGEB2O15479 319 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 ARHGEF15O94989 841 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 PSMC5P62195 406 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 TMEM62Q0P6H9 643 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 XKR3Q5GH77 459 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 TSHZ1Q6ZSZ6 1077 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 NOSTRINQ8IVI9 506 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 BANK1Q8NDB2 785 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 CDHR5Q9HBB8 845 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 COL4A6Q14031 1691 aa18.78■□□□□ 0.6
APTR-201ENST00000398043 FNDC1Q4ZHG4 1894 aaPredicted RBP18.77■□□□□ 0.6
APTR-201ENST00000398043 TMEM150BA6NC51 233 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 NEMFO60524 1076 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 GPR32O75388 356 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 GJB5O95377 273 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 QARSP47897 775 aaKnown RBP18.77■□□□□ 0.6
APTR-201ENST00000398043 EPHA7Q15375 998 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 CALCRLQ16602 461 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 ANO5Q75V66 913 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 USP38Q8NB14 1042 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 TMEM40Q8WWA1 233 aa18.77■□□□□ 0.6
APTR-201ENST00000398043 EYSQ5T1H1 3165 aa18.77■□□□□ 0.59
APTR-201ENST00000398043 KIAA1671Q9BY89 1806 aa18.77■□□□□ 0.59
APTR-201ENST00000398043 COL4A4P53420 1690 aaPredicted RBP18.76■□□□□ 0.59
APTR-201ENST00000398043 PRRC2BQ5JSZ5 2229 aaKnown RBP18.76■□□□□ 0.59
APTR-201ENST00000398043 IGKV6-21A0A0C4DH24 114 aa18.76■□□□□ 0.59
APTR-201ENST00000398043 BAG4O95429 457 aaKnown RBP18.76■□□□□ 0.59
APTR-201ENST00000398043 P4HBP07237 508 aaKnown RBP18.76■□□□□ 0.59
APTR-201ENST00000398043 CA3P07451 260 aa18.76■□□□□ 0.59
APTR-201ENST00000398043 GJB2P29033 226 aa18.76■□□□□ 0.59
APTR-201ENST00000398043 TOB1P50616 345 aaPredicted RBP18.76■□□□□ 0.59
APTR-201ENST00000398043 CUL4AQ13619 759 aa18.76■□□□□ 0.59
APTR-201ENST00000398043 EFCAB12Q6NXP0 572 aa18.76■□□□□ 0.59
APTR-201ENST00000398043 SLC28A3Q9HAS3 691 aa18.76■□□□□ 0.59
APTR-201ENST00000398043 PCDHA12Q9UN75 941 aa18.76■□□□□ 0.59
APTR-201ENST00000398043 M0QZ92 97 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 CD52P31358 61 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 MCM7P33993 719 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 TRAPPC10P48553 1259 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 CLCN3P51790 818 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 HTRA4P83105 476 aaPredicted RBP18.75■□□□□ 0.59
APTR-201ENST00000398043 TAP1Q03518 808 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 ORC2Q13416 577 aaPredicted RBP18.75■□□□□ 0.59
APTR-201ENST00000398043 RTN4RL1Q86UN2 441 aaPredicted RBP18.75■□□□□ 0.59
APTR-201ENST00000398043 C4orf19Q8IY42 314 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 CRIPAKQ8N1N5 446 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 C4orf32Q8N8J7 132 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 LINC01599Q8WXQ3 324 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 MYLIPQ8WY64 445 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 TOP1MTQ969P6 601 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 HSD17B14Q9BPX1 270 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 ADAMTS10Q9H324 1103 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 TTC12Q9H892 705 aaPredicted RBP18.75■□□□□ 0.59
APTR-201ENST00000398043 RGL1Q9NZL6 768 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 PADI3Q9ULW8 664 aa18.75■□□□□ 0.59
APTR-201ENST00000398043 ATG2AQ2TAZ0 1938 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 PRUNE2Q8WUY3 3088 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 LCHNA4D1U4 455 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 TLL1O43897 1013 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 SLITRK3O94933 977 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 AMHP03971 560 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 VTNP04004 478 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 MTERF2Q49AM1 385 aa18.74■□□□□ 0.59
APTR-201ENST00000398043 PPP2R2DQ66LE6 453 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms