RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SSBP05455 408 aaKnown RBP eCLIP26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 SMIM10L2AP0DMW4 78 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 SMIM10L2BP0DMW5 78 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 MNX1P50219 401 aaPredicted RBP26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 MTERF2Q49AM1 385 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 NAALADL2Q58DX5 795 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 CEP170P1Q96L14 293 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 SH2D3AQ9BRG2 576 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 BHMT2Q9H2M3 363 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 STARD7Q9NQZ5 370 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 TNRC18O15417 2968 aaPredicted RBP26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 ARID2Q68CP9 1835 aa26.32■■□□□ 1.8
TSPAN4-203ENST00000397397 ARHGEF35A5YM69 484 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 ZNF202O95125 648 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 PLA2G4BP0C869 781 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 INSRRP14616 1297 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 NPEPPSP55786 919 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 PPFIA1Q13136 1202 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 MCM6Q14566 821 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 ZNF484Q5JVG2 852 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 FMR1NBQ8N0W7 255 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 C7orf31Q8N865 590 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 ENGASEQ8NFI3 743 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 LARP4BQ92615 738 aaKnown RBP26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 KAT6AQ92794 2004 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 CUEDC2Q9H467 287 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 CYP26B1Q9NR63 512 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 SERTAD1Q9UHV2 236 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 NR1I2O75469 434 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 RARRES1P49788 294 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 IGBP1P78318 339 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 ITGA7Q13683 1181 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 DHX8Q14562 1220 aaKnown RBP26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 CEP57L1Q8IYX8 460 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 HDAC6Q9UBN7 1215 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 USP25Q9UHP3 1055 aa26.31■■□□□ 1.8
TSPAN4-203ENST00000397397 COL1A2P08123 1366 aa26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 SNW1Q13573 536 aaKnown RBP26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 GRIK4Q16099 956 aa26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 LONRF3Q496Y0 759 aa26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 FAM47CQ5HY64 1035 aa26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 DIS3LQ8TF46 1054 aaKnown RBP26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 TRAPPC12Q8WVT3 735 aa26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 SENP6Q9GZR1 1112 aaPredicted RBP26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 SETD4Q9NVD3 440 aa26.3■■□□□ 1.8
TSPAN4-203ENST00000397397 GRIN2DO15399 1336 aa26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 A0A0U1RQG5 324 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 RRN3P2A6NIE6 340 aa26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 ZBTB42B2RXF5 422 aa26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 ACTN4O43707 911 aaKnown RBP26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 TARBP2Q15633 366 aaKnown RBP26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 NFRKBQ6P4R8 1299 aa26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 SV2BQ7L1I2 683 aa26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 SYT2Q8N9I0 419 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-203ENST00000397397 SLFN14P0C7P3 912 aa26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 PTMSP20962 102 aa26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 SLC12A3P55017 1021 aa26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 CNNM3Q8NE01 707 aa26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 MAGEF1Q9HAY2 307 aa26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 PPME1Q9Y570 386 aa26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 MKI67P46013 3256 aaKnown RBP26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 NRCAMQ92823 1304 aa26.28■■□□□ 1.8
TSPAN4-203ENST00000397397 C17orf102A2RUQ5 167 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 KINO60870 393 aaKnown RBP26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 PADI6Q6TGC4 694 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 KRBA2Q6ZNG9 492 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 GPT2Q8TD30 523 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 LMBR1Q8WVP7 490 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 PAWRQ96IZ0 340 aaKnown RBP26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 CEP89Q96ST8 783 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 C11orf49Q9H6J7 331 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 DACT1Q9NYF0 836 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 GTF2IRD1Q9UHL9 959 aa26.27■■□□□ 1.8
TSPAN4-203ENST00000397397 USO1O60763 962 aaKnown RBP26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 MBD3O95983 291 aa26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 GNAT1P11488 350 aa26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 COL6A1P12109 1028 aa26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 PTPN11Q06124 597 aaPredicted RBP26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 TBC1D8BQ0IIM8 1120 aa26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 SESTD1Q86VW0 696 aa26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 GPBP1Q86WP2 473 aa26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 STAMQ92783 540 aa26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 BMP2KQ9NSY1 1161 aaPredicted RBP26.26■■□□□ 1.79
TSPAN4-203ENST00000397397 ARVCFO00192 962 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 RFC5P40937 340 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 POLGP54098 1239 aaPredicted RBP26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 HIC1Q14526 733 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 NFKBIBQ15653 356 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 RINT1Q6NUQ1 792 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 NECAB2Q7Z6G3 386 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 SLC43A3Q8NBI5 491 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 RUSC1Q9BVN2 902 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 TNMDQ9H2S6 317 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 KBTBD4Q9NVX7 518 aa26.25■■□□□ 1.79
TSPAN4-203ENST00000397397 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 DGAT1O75907 488 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 KLRC1P26715 233 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 AFMP43652 599 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 ZNF200P98182 395 aaPredicted RBP26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 GDF6Q6KF10 455 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms