RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MED24O75448 989 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 SERPINC1P01008 464 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 TPM2P07951 284 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 TCF7P36402 384 aaPredicted RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 BRDTQ58F21 947 aaPredicted RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 ZNF658Q5TYW1 1059 aaPredicted RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 CDKAL1Q5VV42 579 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 ARMCX5Q6P1M9 558 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 TPH2Q8IWU9 490 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 LXNQ9BS40 222 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 NT5C3AQ9H0P0 336 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 POTEB3A0JP26 581 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 MSCO60682 206 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 SLITRK3O94933 977 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 RPN1P04843 607 aaKnown RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 MMP3P08254 477 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 SPATA31C1P0DKV0 1188 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 MUTP22033 750 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 QARSP47897 775 aaKnown RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 CPT1AP50416 773 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 CTTNQ14247 550 aaKnown RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 HYIQ5T013 277 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 RRAGBQ5VZM2 374 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 FAM160B1Q5W0V3 765 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 SWSAP1Q6NVH7 229 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 POTEBQ6S5H4 581 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 APTXQ7Z2E3 356 aaKnown RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 LRRC15Q8TF66 581 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 ATP6V0A1Q93050 837 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 SPC25Q9HBM1 224 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 PRDM10Q9NQV6 1147 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 ZNF302Q9NR11 478 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 GABBR1Q9UBS5 961 aa16.56■□□□□ 0.24
CAPN3-207ENST00000397200 R3HCC1Q9Y3T6 440 aaKnown RBP16.56■□□□□ 0.24
CAPN3-207ENST00000397200 HTTP42858 3142 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 POTEFA5A3E0 1075 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 DKC1O60832 514 aaKnown RBP eCLIP16.55■□□□□ 0.24
CAPN3-207ENST00000397200 PLCG1P19174 1290 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 PSMC5P62195 406 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 GRB10Q13322 594 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 UTP14CQ5TAP6 766 aaKnown RBP16.55■□□□□ 0.24
CAPN3-207ENST00000397200 CCDC60Q8IWA6 550 aaPredicted RBP16.55■□□□□ 0.24
CAPN3-207ENST00000397200 STAMQ92783 540 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 PNMA5Q96PV4 448 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 PLIN2Q99541 437 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.24
CAPN3-207ENST00000397200 BLZF1Q9H2G9 400 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 XPNPEP3Q9NQH7 507 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 KIAA1024Q9UPX6 916 aa16.55■□□□□ 0.24
CAPN3-207ENST00000397200 FRMPD3Q5JV73 1810 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 IGSF9BQ9UPX0 1349 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 IGKV6D-21A0A0A0MT36 114 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 A0A1B0GTH6 734 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 A6NJR5 290 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 KLRC4O43908 158 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 PPFIA4O75335 1185 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 C6orf222P0C671 652 aaPredicted RBP16.54■□□□□ 0.24
CAPN3-207ENST00000397200 SKILP12757 684 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 GJA9P57773 515 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 TBX2Q13207 712 aaPredicted RBP16.54■□□□□ 0.24
CAPN3-207ENST00000397200 ECM1Q16610 540 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 FSCN1Q16658 493 aaKnown RBP16.54■□□□□ 0.24
CAPN3-207ENST00000397200 UGCGQ16739 394 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 DGKDQ16760 1214 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 TMEM119Q4V9L6 283 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 POTEGQ6S5H5 508 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 GLG1Q92896 1179 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 PRIMPOLQ96LW4 560 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 UPF3AQ9H1J1 476 aaKnown RBP16.54■□□□□ 0.24
CAPN3-207ENST00000397200 RWDD2AQ9UIY3 292 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 LOXHD1Q8IVV2 1947 aa16.54■□□□□ 0.24
CAPN3-207ENST00000397200 EMSYQ7Z589 1322 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 LGR5O75473 907 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 PGK1P00558 417 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 HOXD8P13378 290 aaPredicted RBP16.53■□□□□ 0.24
CAPN3-207ENST00000397200 STAT5BP51692 787 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 KCTD17Q8N5Z5 321 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 AFAP1L1Q8TED9 768 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 PCYT2Q99447 389 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 SMARCAD1Q9H4L7 1026 aa16.53■□□□□ 0.24
CAPN3-207ENST00000397200 SAMSN1Q9NSI8 373 aaKnown RBP16.53■□□□□ 0.24
CAPN3-207ENST00000397200 MAFBQ9Y5Q3 323 aaPredicted RBP16.53■□□□□ 0.24
CAPN3-207ENST00000397200 RHOBTB3O94955 611 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 LYPLA2O95372 231 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 MYCP01106 439 aaPredicted RBP16.52■□□□□ 0.24
CAPN3-207ENST00000397200 LGALS2P05162 132 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 SFPQP23246 707 aaKnown RBP eCLIP16.52■□□□□ 0.24
CAPN3-207ENST00000397200 BEX3Q00994 111 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 C4orf19Q8IY42 314 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 SMYD4Q8IYR2 804 aaPredicted RBP16.52■□□□□ 0.24
CAPN3-207ENST00000397200 NACC1Q96RE7 527 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 TMX1Q9H3N1 280 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 WRAP73Q9P2S5 460 aaPredicted RBP16.52■□□□□ 0.24
CAPN3-207ENST00000397200 STK17AQ9UEE5 414 aa16.52■□□□□ 0.24
CAPN3-207ENST00000397200 DNM3Q9UQ16 869 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms