RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 TET1Q8NFU7 2136 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 ZSWIM4Q9H7M6 989 aa11.89□□□□□ -0.51
NUP98-205ENST00000397007 SMIM35A0A1B0GVV1 85 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 ZEB2O60315 1214 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 EYA4O95677 639 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 MBTPS1Q14703 1052 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 PAWRQ96IZ0 340 aaKnown RBP11.88□□□□□ -0.51
NUP98-205ENST00000397007 FAM167AQ96KS9 214 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 CYP26B1Q9NR63 512 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 TFIP11Q9UBB9 837 aaKnown RBP11.88□□□□□ -0.51
NUP98-205ENST00000397007 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 YWHABP31946 246 aaKnown RBP11.88□□□□□ -0.51
NUP98-205ENST00000397007 KRT85P78386 507 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 CCDC113Q9H0I3 377 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 KCND2Q9NZV8 630 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 TMEM150BA6NC51 233 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 VWA3AA6NCI4 1184 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 TRIM43BA6NCK2 446 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 BACH1O14867 736 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 GRIK4Q16099 956 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 FAM160B1Q5W0V3 765 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 TRIM43Q96BQ3 446 aaPredicted RBP11.88□□□□□ -0.51
NUP98-205ENST00000397007 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 ATP6V1DQ9Y5K8 247 aa11.88□□□□□ -0.51
NUP98-205ENST00000397007 MROH7Q68CQ1 1323 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 INSRRP14616 1297 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 CNGA1P29973 690 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 NT5DC1Q5TFE4 455 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 RBM43Q6ZSC3 357 aaKnown RBP11.87□□□□□ -0.51
NUP98-205ENST00000397007 RAD54LQ92698 747 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 NTPCRQ9BSD7 190 aaKnown RBP11.87□□□□□ -0.51
NUP98-205ENST00000397007 PPP1R37O75864 691 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 TCTN1Q2MV58 587 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 KIAA0319LQ8IZA0 1049 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 ATP6V0A1Q93050 837 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 NOC4LQ9BVI4 516 aaKnown RBP11.87□□□□□ -0.51
NUP98-205ENST00000397007 SENP6Q9GZR1 1112 aaPredicted RBP11.87□□□□□ -0.51
NUP98-205ENST00000397007 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 STK17AQ9UEE5 414 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 REV3LO60673 3130 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 KBTBD13C9JR72 458 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
NUP98-205ENST00000397007 KLRC4O43908 158 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 MARCKSP29966 332 aaPredicted RBP11.87□□□□□ -0.51
NUP98-205ENST00000397007 CTTNQ14247 550 aaKnown RBP11.87□□□□□ -0.51
NUP98-205ENST00000397007 NCAPH2Q6IBW4 605 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 TNS4Q8IZW8 715 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 OSBPL7Q9BZF2 842 aa11.87□□□□□ -0.51
NUP98-205ENST00000397007 RRN3P2A6NIE6 340 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 CDC25AP30304 524 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 ZNF200P98182 395 aaPredicted RBP11.86□□□□□ -0.51
NUP98-205ENST00000397007 HAUS3Q68CZ6 603 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 UIMC1Q96RL1 719 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 CUEDC2Q9H467 287 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 ZNF215Q9UL58 517 aaPredicted RBP11.86□□□□□ -0.51
NUP98-205ENST00000397007 LAMA2P24043 3122 aaKnown RBP11.86□□□□□ -0.51
NUP98-205ENST00000397007 TRANK1O15050 2925 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 TREHO43280 583 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 PLCG1P19174 1290 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 RFC5P40937 340 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 DRP2Q13474 957 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 TRIM60Q495X7 471 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 NECAB2Q7Z6G3 386 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 CABP7Q86V35 215 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 ST6GALNAC4Q9H4F1 302 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 IFT122Q9HBG6 1241 aa11.86□□□□□ -0.51
NUP98-205ENST00000397007 GAS2O43903 313 aaKnown RBP11.85□□□□□ -0.51
NUP98-205ENST00000397007 TFRCP02786 760 aaKnown RBP11.85□□□□□ -0.51
NUP98-205ENST00000397007 CYP11B2P19099 503 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
NUP98-205ENST00000397007 AMHR2Q16671 573 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 RINT1Q6NUQ1 792 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 TIGD1Q96MW7 591 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 TIPINQ9BVW5 301 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 SORBS3O60504 671 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 GADD45BO75293 160 aaPredicted RBP11.85□□□□□ -0.51
NUP98-205ENST00000397007 CHRNA1P02708 482 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 MYL3P08590 195 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 TMEM266Q2M3C6 531 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 NACC1Q96RE7 527 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 RUSC1Q9BVN2 902 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 NT5C3AQ9H0P0 336 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 MAGEF1Q9HAY2 307 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 SPC25Q9HBM1 224 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 TRMT13Q9NUP7 481 aaKnown RBP11.85□□□□□ -0.51
NUP98-205ENST00000397007 ABLIM1O14639 778 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 PFKFB1P16118 471 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 COBLL1Q53SF7 1204 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 C7orf25Q9BPX7 421 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 STARD7Q9NQZ5 370 aa11.85□□□□□ -0.51
NUP98-205ENST00000397007 TDRD15B5MCY1 1934 aaKnown RBP11.85□□□□□ -0.51
NUP98-205ENST00000397007 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
NUP98-205ENST00000397007 TAS1R3Q7RTX0 852 aa11.84□□□□□ -0.51
NUP98-205ENST00000397007 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms