RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 AHI1Q8N157 1196 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 TEKT3Q9BXF9 490 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ZWILCHQ9H900 591 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 CNGB3Q9NQW8 809 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PSMC2P35998 433 aaKnown RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PSMD2Q13200 908 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 PDCLQ13371 301 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 KRT72Q14CN4 511 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 GPT2Q8TD30 523 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 SCG3Q8WXD2 468 aaKnown RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 RHBDL2Q9NX52 303 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
COL4A4-201ENST00000396625 BLOC1S6Q9UL45 172 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 KIAA1024Q9UPX6 916 aa11.03□□□□□ -0.64
COL4A4-201ENST00000396625 ARHGEF12Q9NZN5 1544 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 VIRMAQ69YN4 1812 aaKnown RBP11.02□□□□□ -0.64
COL4A4-201ENST00000396625 CACNA1FO60840 1977 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 C4BPBP20851 252 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 CMA1P23946 247 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 TFAMQ00059 246 aaKnown RBP11.02□□□□□ -0.64
COL4A4-201ENST00000396625 PPARAQ07869 468 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 INPP5AQ14642 412 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 MAPKAPK5Q8IW41 473 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 TEX2Q8IWB9 1127 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 UBXN8O00124 270 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 ZNF18P17022 549 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 ST13P50502 369 aaKnown RBP11.02□□□□□ -0.64
COL4A4-201ENST00000396625 SLC44A4Q53GD3 710 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 FGD2Q7Z6J4 655 aa11.02□□□□□ -0.64
COL4A4-201ENST00000396625 UBE2TQ9NPD8 197 aaPredicted RBP11.02□□□□□ -0.64
COL4A4-201ENST00000396625 TOM1O60784 492 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 RHOBTB1O94844 696 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 GGCXP38435 758 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 GALNT17Q6IS24 598 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 PARVGQ9HBI0 331 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 KLC4Q9NSK0 619 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 MROH5Q6ZUA9 1318 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 HOXA7P31268 230 aaPredicted RBP11.02□□□□□ -0.65
COL4A4-201ENST00000396625 WASHC5Q12768 1159 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 FBXO38Q6PIJ6 1188 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 NRBP1Q9UHY1 535 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 CITO14578 2027 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 HNRNPRO43390 633 aaKnown RBP11.02□□□□□ -0.65
COL4A4-201ENST00000396625 MAGOHP61326 146 aaKnown RBP11.02□□□□□ -0.65
COL4A4-201ENST00000396625 TRIP4Q15650 581 aaPredicted RBP11.02□□□□□ -0.65
COL4A4-201ENST00000396625 ABI1Q8IZP0 508 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 OPTNQ96CV9 577 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 DHTKD1Q96HY7 919 aaPredicted RBP11.02□□□□□ -0.65
COL4A4-201ENST00000396625 CUEDC2Q9H467 287 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 DDIASQ8IXT1 998 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 EML4Q9HC35 981 aaKnown RBP11.02□□□□□ -0.65
COL4A4-201ENST00000396625 ACEP12821 1306 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 UGGT2Q9NYU1 1516 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 GOLGA8MH3BSY2 632 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 HAUS5O94927 633 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 MLH1P40692 756 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 PTGDRQ13258 359 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 CUL3Q13618 768 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 SENP1Q9P0U3 644 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 PIK3C2GO75747 1445 aa11.02□□□□□ -0.65
COL4A4-201ENST00000396625 XPOTO43592 962 aaKnown RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 RAPGEF3O95398 923 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 CC2D2BQ6DHV5 1058 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 RFX8Q6ZV50 586 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 RRM2BQ7LG56 351 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 CMTR1Q8N1G2 835 aaKnown RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 CNBD2Q96M20 576 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 USP28Q96RU2 1077 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 PRPF4O43172 522 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 MYO1DO94832 1006 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 OTUD7AQ8TE49 926 aaPredicted RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 ULK4Q96C45 1275 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 ETNK1Q9HBU6 452 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 PCDHA7Q9UN72 937 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 CDH2P19022 906 aaPredicted RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 POLA2Q14181 598 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 NINQ8N4C6 2090 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 SERPING1P05155 500 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 CCNYL1Q8N7R7 359 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 GCNAQ96QF7 691 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 BRIP1Q9BX63 1249 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 FTOQ9C0B1 505 aaKnown RBP eCLIP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 ZNF556Q9HAH1 456 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 ITGB1BP2Q9UKP3 347 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 THRAP3Q9Y2W1 955 aaKnown RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 GAP43P17677 238 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 KCNA3P22001 575 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 FAM47AQ5JRC9 791 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 C1orf228Q6PIY5 440 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 MLXIPLQ9NP71 852 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 CYLC2Q14093 348 aaPredicted RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 PRAG1Q86YV5 1406 aa11.01□□□□□ -0.65
COL4A4-201ENST00000396625 POLR1AO95602 1720 aaPredicted RBP11.01□□□□□ -0.65
COL4A4-201ENST00000396625 ENO4A6NNW6 628 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms