RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 AZI2Q9H6S1 392 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 PANK4Q9NVE7 773 aa10.72□□□□□ -0.69
TRIM39-203ENST00000396547 SEC63Q9UGP8 760 aaKnown RBP10.72□□□□□ -0.69
TRIM39-203ENST00000396547 TMEM110-MUSTN1A8MSY1 372 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 RFC4P35249 363 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 DRP2Q13474 957 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 CUL1Q13616 776 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 TMEM266Q2M3C6 531 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 FAM26FQ5R3K3 315 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 LRIG3Q6UXM1 1119 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC26Q8TAB7 109 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 NSUN4Q96CB9 384 aaKnown RBP10.71□□□□□ -0.69
TRIM39-203ENST00000396547 SPDL1Q96EA4 605 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 AK8Q96MA6 479 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 FER1L6Q2WGJ9 1857 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 E9PMD0 336 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 C21orf2O43822 256 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 ORC4O43929 436 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 ZBTB7AO95365 584 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 ANP32DO95626 131 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 MYBL1P10243 752 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 KCNH2Q12809 1159 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 KRT25Q7Z3Z0 450 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 MAPKAPK5Q8IW41 473 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 ZNF34Q8IZ26 560 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 TGFBRAP1Q8WUH2 860 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 CCT6BQ92526 530 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 CUL5Q93034 780 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 PLCD4Q9BRC7 762 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.694e-7■■□□□ 14.2
TRIM39-203ENST00000396547 SAMD15Q9P1V8 674 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 DBR1Q9UK59 544 aaKnown RBP10.71□□□□□ -0.69
TRIM39-203ENST00000396547 PCDHGC5Q9Y5F6 944 aa10.71□□□□□ -0.69
TRIM39-203ENST00000396547 DIAPH2O60879 1101 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 PPP1R2P41236 205 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 LRRC63Q05C16 580 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 COASYQ13057 564 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 UBAP2Q5T6F2 1119 aaKnown RBP10.71□□□□□ -0.7
TRIM39-203ENST00000396547 C3orf67Q6ZVT6 689 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 TMC3Q7Z5M5 1100 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 REXO1Q8N1G1 1221 aaKnown RBP10.71□□□□□ -0.7
TRIM39-203ENST00000396547 IQCDQ96DY2 449 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 FMO2Q99518 471 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 PAGR1Q9BTK6 254 aa10.71□□□□□ -0.7
TRIM39-203ENST00000396547 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.7
TRIM39-203ENST00000396547 INTS9Q9NV88 658 aaKnown RBP10.71□□□□□ -0.7
TRIM39-203ENST00000396547 ENO4A6NNW6 628 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 A8MUI8 341 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 FOXO6A8MYZ6 492 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 F8VZ95 297 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 RGS16O15492 202 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-203ENST00000396547 GNAQP50148 359 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 USP11P51784 963 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 KCNJ2P63252 427 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 ECM1Q16610 540 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 UBE2SQ16763 222 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 SYT17Q9BSW7 474 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 ABCF3Q9NUQ8 709 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 CHORDC1Q9UHD1 332 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-203ENST00000396547 CCDC189A1A4V9 331 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 M0R2N6 131 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 LAD1O00515 517 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 MAP2K1Q02750 393 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-203ENST00000396547 MTMR3Q13615 1198 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 ZKSCAN8Q15776 578 aaPredicted RBP10.7□□□□□ -0.7
TRIM39-203ENST00000396547 AADACL2Q6P093 401 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 ANKRD42Q8N9B4 389 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 SCFD2Q8WU76 684 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 FAXDC2Q96IV6 333 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 MAGEF1Q9HAY2 307 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 OSGEPQ9NPF4 335 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRIM39-203ENST00000396547 SH3GLB2Q9NR46 395 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
TRIM39-203ENST00000396547 TNRC6CQ9HCJ0 1690 aaKnown RBP10.7□□□□□ -0.7
TRIM39-203ENST00000396547 GFPT2O94808 682 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 GNA11P29992 359 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 PRPHP41219 470 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 CCNHP51946 323 aaPredicted RBP10.69□□□□□ -0.7
TRIM39-203ENST00000396547 GRM4Q14833 912 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 RAD54LQ92698 747 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 PBKQ96KB5 322 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 KIAA1024Q9UPX6 916 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 BCS1LQ9Y276 419 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 XRCC4Q13426 336 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 SLC29A2Q14542 456 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 DENND2CQ68D51 928 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 TRIM68Q6AZZ1 485 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 SPICE1Q8N0Z3 855 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 AGAP11Q8TF27 550 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 CELF1Q92879 486 aaKnown RBP10.69□□□□□ -0.7
TRIM39-203ENST00000396547 KIF9Q9HAQ2 790 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 KCNK9Q9NPC2 374 aa10.69□□□□□ -0.7
TRIM39-203ENST00000396547 DNAJC17Q9NVM6 304 aaKnown RBP10.69□□□□□ -0.7
TRIM39-203ENST00000396547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRIM39-203ENST00000396547 TMOD4Q9NZQ9 345 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms