RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 RDM1Q8NG50 284 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 NSUN6Q8TEA1 469 aaKnown RBP17.72■□□□□ 0.43
SNX6-202ENST00000396526 RABGGTAQ92696 567 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 SECISBP2LQ93073 1101 aaKnown RBP17.72■□□□□ 0.43
SNX6-202ENST00000396526 PXMP2Q9NR77 195 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 ZNF131P52739 623 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 CHMP4BP1P59074 171 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 ZNF720Q7Z2F6 126 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 IWS1Q96ST2 819 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 TEX13BQ9BXU2 312 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 TMEM206Q9H813 350 aa17.72■□□□□ 0.43
SNX6-202ENST00000396526 REXO2Q9Y3B8 237 aaKnown RBP17.72■□□□□ 0.43
SNX6-202ENST00000396526 NMT1P30419 496 aaKnown RBP17.71■□□□□ 0.43
SNX6-202ENST00000396526 HERVK_113P62684 666 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 KCNMA1Q12791 1236 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 NFIL3Q16649 462 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 FAM186BQ8IYM0 893 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 IL31RAQ8NI17 732 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 KLRG1Q96E93 195 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 MYO6Q9UM54 1294 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 CTAGE15A4D2H0 777 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 CLIC2O15247 247 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 CTAGE8P0CG41 777 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 PSMC5P62195 406 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
SNX6-202ENST00000396526 RAPGEF1Q13905 1077 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 PRAMEF18Q5VWM3 479 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 CTAGE6Q86UF2 777 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 CTAGE4Q8IX94 777 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 TRIM58Q8NG06 486 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 PCDHA13Q9Y5I0 950 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 LYPLA2O95372 231 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 TMCO3Q6UWJ1 677 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 BAP1Q92560 729 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 GPRASP2Q96D09 838 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 DRC1Q96MC2 740 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 ARID3AQ99856 593 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 POLD4Q9HCU8 107 aa17.71■□□□□ 0.43
SNX6-202ENST00000396526 BZW2Q9Y6E2 419 aaKnown RBP17.71■□□□□ 0.43
SNX6-202ENST00000396526 FANCGO15287 622 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 HIP1RO75146 1068 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 MAPTP10636 758 aaKnown RBP17.7■□□□□ 0.42
SNX6-202ENST00000396526 CYP27A1Q02318 531 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 DGKZQ13574 1117 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 ASIC2Q16515 512 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 FMNL3Q8IVF7 1028 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 PLCB1Q9NQ66 1216 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 ARHGAP20Q9P2F6 1191 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 A0A0U1RQJ8 604 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 NKRFO15226 690 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX6-202ENST00000396526 NR3C2P08235 984 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 GNPTABQ3T906 1256 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 OTUD6AQ7L8S5 288 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 VPS36Q86VN1 386 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 CCDC155Q8N6L0 562 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 TRPM4Q8TD43 1214 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 ATRIPQ8WXE1 791 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 ACAD9Q9H845 621 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 MYPNQ86TC9 1320 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 ZBTB39O15060 712 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 EPHB6O15197 1021 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 KLHL30Q0D2K2 578 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 PLS1Q14651 629 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 C4orf19Q8IY42 314 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 CSADQ9Y600 493 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
SNX6-202ENST00000396526 ANO9A1A5B4 782 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 DHX15O43143 795 aaKnown RBP17.69■□□□□ 0.42
SNX6-202ENST00000396526 AKAP3O75969 853 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 TUBBP07437 444 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 KRT13P13646 458 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 CKAP4Q07065 602 aaKnown RBP17.69■□□□□ 0.42
SNX6-202ENST00000396526 MAPK8IP2Q13387 824 aaPredicted RBP17.69■□□□□ 0.42
SNX6-202ENST00000396526 MYBPC2Q14324 1141 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 ASTN1O14525 1302 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 K7ENM7 598 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 STAM2O75886 525 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 CETN1Q12798 172 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 NOL9Q5SY16 702 aaKnown RBP17.69■□□□□ 0.42
SNX6-202ENST00000396526 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
SNX6-202ENST00000396526 ANKEF1Q9NU02 776 aa17.69■□□□□ 0.42
SNX6-202ENST00000396526 MACROD2A1Z1Q3 448 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 EXOC3O60645 756 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 YWHABP31946 246 aaKnown RBP17.68■□□□□ 0.42
SNX6-202ENST00000396526 NAP1L1P55209 391 aaKnown RBP17.68■□□□□ 0.42
SNX6-202ENST00000396526 ITGB3BPQ13352 177 aaPredicted RBP17.68■□□□□ 0.42
SNX6-202ENST00000396526 FBXO38Q6PIJ6 1188 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 CATSPERGQ6ZRH7 1159 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 VSIG10LQ86VR7 867 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 SULF1Q8IWU6 871 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 ACCSQ96QU6 501 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 GTPBP10A4D1E9 387 aaKnown RBP17.68■□□□□ 0.42
SNX6-202ENST00000396526 SMTNP53814 917 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
SNX6-202ENST00000396526 IQCEQ6IPM2 695 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 ZNF746Q6NUN9 644 aaPredicted RBP17.68■□□□□ 0.42
SNX6-202ENST00000396526 ATP6V0A1Q93050 837 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 PUF60Q9UHX1 559 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms