RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 RUBCNQ92622 972 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 CCDC47Q96A33 483 aaKnown RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 INPP4AQ96PE3 977 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 FAM124BQ9H5Z6 455 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 TBC1D22BQ9NU19 505 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 PUF60Q9UHX1 559 aaKnown RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 MGAMO43451 1857 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 RBM47A0AV96 593 aaKnown RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 PDXKO00764 312 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 MSH4O15457 936 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 HOXD8P13378 290 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 CYP11B2P19099 503 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 UBA7P41226 1012 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 PRCPP42785 496 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 GMPSP49915 693 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 DNM2P50570 870 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 CLDN10P78369 228 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 SUPT20HL1Q3ZLR7 823 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 LRCH2Q5VUJ6 765 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 ARMC3Q5W041 872 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 ZNF746Q6NUN9 644 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 C1orf186Q6ZWK4 172 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 FRMD5Q7Z6J6 570 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 FMNL3Q8IVF7 1028 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 KIRREL3Q8IZU9 778 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 ABRAQ8N0Z2 381 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 GIPC2Q8TF65 315 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 IRX2Q9BZI1 471 aaPredicted RBP5.9□□□□□ -1.47
VPS41-203ENST00000395969 LRWD1Q9UFC0 647 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 MCM8Q9UJA3 840 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 HPCAL4Q9UM19 191 aa5.9□□□□□ -1.47
VPS41-203ENST00000395969 DNAJC25-GNG10A0A024R161 153 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 MYMKA6NI61 221 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 FAM86B1E9PN63 330 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 BIN1O00499 593 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 VWA5AO00534 786 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 PSMA7O14818 248 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 P4HA2O15460 535 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 NEBLO76041 1014 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 FSBPO95073 299 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 PIGRP01833 764 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 CCDC175P0C221 793 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 FAM86B2P0C5J1 330 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 PPARDQ03181 441 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 STIM1Q13586 685 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 WHAMMP3Q1A5X7 153 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 MAP9Q49MG5 647 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 CEP55Q53EZ4 464 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 ARSHQ5FYA8 562 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 KRT79Q5XKE5 535 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 RIOX2Q8IUF8 465 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 CNGA4Q8IV77 575 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 CCDC170Q8IYT3 715 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 ZNF280CQ8ND82 737 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 EMID1Q96A84 441 aaPredicted RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 MIEF2Q96C03 454 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 AGO4Q9HCK5 861 aaKnown RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 FANCLQ9NW38 375 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 ZNF214Q9UL59 606 aaPredicted RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 JAG2Q9Y219 1238 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 SIK3Q9Y2K2 1263 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 NFE2L3Q9Y4A8 694 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 ADGRG1Q9Y653 693 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 POLR2AP24928 1970 aaKnown RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 GRIN2DO15399 1336 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 FRMPD2Q68DX3 1309 aaPredicted RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 IGSF9BQ9UPX0 1349 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 FRMPD3Q5JV73 1810 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 ZNFX1Q9P2E3 1918 aaKnown RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 SMCHD1A6NHR9 2005 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 ANK1P16157 1881 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 EBAG9O00559 213 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 KIAA0391O15091 583 aaKnown RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 TDP2O95551 362 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 GOLGA8HP0CJ92 632 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 IRAK1P51617 712 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 JAK3P52333 1124 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 ITIH3Q06033 890 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 KARSQ15046 597 aaKnown RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 PTPN21Q16825 1174 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 SPIRE2Q8WWL2 714 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 CDHR1Q96JP9 859 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 CABS1Q96KC9 395 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 TMEM260Q9NX78 707 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 CNOT7Q9UIV1 285 aaKnown RBP5.89□□□□□ -1.47
VPS41-203ENST00000395969 HACL1Q9UJ83 578 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 PCDHA12Q9UN75 941 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 STYXL1Q9Y6J8 313 aa5.89□□□□□ -1.47
VPS41-203ENST00000395969 SPDYE5A6NIY4 337 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 RASSF10A6NK89 507 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 AGPSO00116 658 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 KIF3CO14782 793 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 PJA2O43164 708 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 MFAP3LO75121 409 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 VCAM1P19320 739 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 CCT5P48643 541 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 COPB1P53618 953 aaKnown RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 AMPD2Q01433 879 aa5.88□□□□□ -1.47
VPS41-203ENST00000395969 FOXD4Q12950 439 aaPredicted RBP5.88□□□□□ -1.47
VPS41-203ENST00000395969 PPIL2Q13356 520 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms