RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 CCT5P48643 541 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TMED2Q15363 201 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 KYAT1Q16773 422 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SLC27A3Q5K4L6 730 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ALKBH5Q6P6C2 394 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 C1orf228Q6PIY5 440 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ENOSF1Q7L5Y1 443 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 DCLK2Q8N568 766 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 KLHL29Q96CT2 875 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 FSD1LQ9BXM9 530 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 EIF2AQ9BY44 585 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ANTXR1Q9H6X2 564 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PCDHA6Q9UN73 950 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PCDHA8Q9Y5H6 950 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 UTYO14607 1347 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SPDYE2BA6NHP3 402 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CLGNO14967 610 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 RAD17O75943 681 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SPDYE6P0CI01 402 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 IFNAR2P48551 515 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 C2orf54Q08AI8 447 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PFKFB3Q16875 520 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 Q3C1V9 767 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CYP4F22Q6NT55 531 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SPDYE1Q8NFV5 336 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ACTR5Q9H9F9 607 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TBK1Q9UHD2 729 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ABCC3O15438 1527 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TMEM247A6NEH6 219 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 GOLGA8SH3BPF8 625 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 DTNBO60941 627 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 LMNAP02545 664 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TAC1P20366 129 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PSMA2P25787 234 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 RASGRF1Q13972 1273 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 EXOC4Q96A65 974 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 GCOM2Q9BZD3 368 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 MOCS3O95396 460 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 MCAMP43121 646 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 DYNLT1P63172 113 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 NR1H3Q13133 447 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ZNF667Q5HYK9 610 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 DSTYKQ6XUX3 929 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 FRA10AC1Q70Z53 315 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ELMOD1Q8N336 334 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CCDC138Q96M89 665 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 RMDN3Q96TC7 470 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ABHD10Q9NUJ1 306 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 NRBP1Q9UHY1 535 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ROBO2Q9HCK4 1378 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 RASGRF2O14827 1237 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ATP5HO75947 161 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 GDF11O95390 407 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 EIF4A3P38919 411 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TAP1Q03518 808 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 RESTQ13127 1097 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 KCNV1Q6PIU1 500 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CHMP6Q96FZ7 201 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 BHMT2Q9H2M3 363 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PCDHB6Q9Y5E3 794 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 REREQ9P2R6 1566 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CAMSAP1Q5T5Y3 1602 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 NVLO15381 856 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TSTA3Q13630 321 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SARM1Q6SZW1 724 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 LRRC31Q6UY01 552 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TRIM72Q6ZMU5 477 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 RNF168Q8IYW5 571 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 MCUQ8NE86 351 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PARD3BQ8TEW8 1205 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 STRBPQ96SI9 672 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ASNSD1Q9NWL6 643 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 FOXP2O15409 715 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 APOEP02649 317 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 NR1D1P20393 614 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 COPB2P35606 906 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 KRT76Q01546 638 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 MYLK4Q86YV6 388 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 XXYLT1Q8NBI6 393 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 MORC4Q8TE76 937 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 FGD4Q96M96 766 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 KIF20BQ96Q89 1820 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CACNA1FO60840 1977 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 HUS1O60921 280 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 CA4P22748 312 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SOX5P35711 763 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PAPOLAP51003 745 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 GPC5P78333 572 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 DRP2Q13474 957 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SPARCL1Q14515 664 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 TAF1BQ53T94 588 aaPredicted RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 FBXL13Q8NEE6 735 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 OLA1Q9NTK5 396 aaKnown RBP5.85□□□□□ -1.47
VPS13C-204ENST00000395898 PIM2Q9P1W9 311 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ANAPC7Q9UJX3 599 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 ZNF521Q96K83 1311 aa5.85□□□□□ -1.47
VPS13C-204ENST00000395898 SASH1O94885 1247 aa5.84□□□□□ -1.47
VPS13C-204ENST00000395898 ESRRAP11474 423 aaPredicted RBP5.84□□□□□ -1.47
VPS13C-204ENST00000395898 PHKA2P46019 1235 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms