RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 HVCN1Q96D96 273 aa5.53□□□□□ -1.52
FGD4-201ENST00000395740 RSRC1Q96IZ7 334 aaKnown RBP5.53□□□□□ -1.52
FGD4-201ENST00000395740 CDK5RAP3Q96JB5 506 aa5.53□□□□□ -1.52
FGD4-201ENST00000395740 CDCA7Q9BWT1 371 aaPredicted RBP5.53□□□□□ -1.52
FGD4-201ENST00000395740 IL17RBQ9NRM6 502 aa5.53□□□□□ -1.52
FGD4-201ENST00000395740 CTNNAL1Q9UBT7 734 aa5.53□□□□□ -1.52
FGD4-201ENST00000395740 RPL26L1Q9UNX3 145 aaKnown RBP5.53□□□□□ -1.52
FGD4-201ENST00000395740 ZNF652Q9Y2D9 606 aa5.53□□□□□ -1.52
FGD4-201ENST00000395740 PCDHA2Q9Y5H9 948 aa5.53□□□□□ -1.52
FGD4-201ENST00000395740 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.53□□□□□ -1.52
FGD4-201ENST00000395740 GREB1LQ9C091 1923 aaPredicted RBP5.53□□□□□ -1.52
FGD4-201ENST00000395740 BAZ2BQ9UIF8 2168 aaKnown RBP5.53□□□□□ -1.52
FGD4-201ENST00000395740 A0A087X0T9 212 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 PP2D1A8MPX8 630 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CYTH3O43739 400 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CAMTA2O94983 1202 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 LDHCP07864 332 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 FAM228BP0C875 321 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 FERP16591 822 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 RFX1P22670 979 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CXCR5P32302 372 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 SEC24CP53992 1094 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 PTENP60484 403 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 DYNLL1P63167 89 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 ELF3P78545 371 aaPredicted RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 TFAP4Q01664 338 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CALCRLQ16602 461 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 BMT2Q1RMZ1 405 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 SPDYAQ5MJ70 313 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 FAM26FQ5R3K3 315 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 DUPD1Q68J44 220 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 MFSD5Q6N075 450 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 C15orf52Q6ZUT6 534 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 FAM228AQ86W67 206 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 NEDD1Q8NHV4 660 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 ATXN2LQ8WWM7 1075 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 COL26A1Q96A83 441 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 MS4A14Q96JA4 679 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 PABPC3Q9H361 631 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 KCTD10Q9H3F6 313 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 SLC39A2Q9NP94 309 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 KCNMB3Q9NPA1 279 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 ABCF2Q9UG63 623 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 NAGPAQ9UK23 515 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 MYH14Q7Z406 1995 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 AFF2P51816 1311 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 SPATA31A5Q5VU36 1347 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 SPATA31A7Q8IWB4 1347 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 hCG_1642624A0A1W2PR95 340 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 SMCO2A6NFE2 343 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 E7ENQ6 273 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 PDXKO00764 312 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CETN3O15182 167 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 BUB1O43683 1085 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CCNT1O60563 726 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 ATP6V1G2O95670 118 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 H2AFZP0C0S5 128 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CCND1P24385 295 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 JAM2P57087 298 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 MECOMQ03112 1051 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 PPATQ06203 517 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CCDC15Q0P6D6 951 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 COASYQ13057 564 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 HLTFQ14527 1009 aaKnown RBP eCLIP5.52□□□□□ -1.53
FGD4-201ENST00000395740 H2AFVQ71UI9 128 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 TAOK1Q7L7X3 1001 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 CPLX4Q7Z7G2 160 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 NT5DC3Q86UY8 548 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 NBPF5PQ86XG9 351 aaPredicted RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 REXO1Q8N1G1 1221 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 METTL13Q8N6R0 699 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 DDX12PQ92771 950 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 LSM14BQ9BX40 385 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 PPANQ9NQ55 473 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 CCDC87Q9NVE4 849 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 RASAL2Q9UJF2 1139 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 AMFRQ9UKV5 643 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 NOC2LQ9Y3T9 749 aaKnown RBP5.52□□□□□ -1.53
FGD4-201ENST00000395740 PFASO15067 1338 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 MYO3BQ8WXR4 1341 aa5.52□□□□□ -1.53
FGD4-201ENST00000395740 MIF4GDA9UHW6 222 aaKnown RBP5.51□□□□□ -1.53
FGD4-201ENST00000395740 F8W031 263 aaPredicted RBP5.51□□□□□ -1.53
FGD4-201ENST00000395740 KCNK3O14649 394 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 ADAMTS3O15072 1205 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 ATP5HO75947 161 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 OAS1P00973 400 aaKnown RBP5.51□□□□□ -1.53
FGD4-201ENST00000395740 TMEM253P0C7T8 217 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 VEGFAP15692 232 aaPredicted RBP5.51□□□□□ -1.53
FGD4-201ENST00000395740 LMNB1P20700 586 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 ATP5DP30049 168 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 HSPA1LP34931 641 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 TECP42680 631 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 GUCY2FP51841 1108 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 NAPAP54920 295 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 POLR2FP61218 127 aaKnown RBP5.51□□□□□ -1.53
FGD4-201ENST00000395740 ITPK1Q13572 414 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 SLC35G1Q2M3R5 365 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 GALNTL6Q49A17 601 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 CCDC38Q502W7 563 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 ASPRV1Q53RT3 343 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms