RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 KIAA1524Q8TCG1 905 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 SENP7Q9BQF6 1050 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 FAM184BQ9ULE4 1060 aa21.4■■□□□ 1.02
LMNB1-202ENST00000395354 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.39■■□□□ 1.01
LMNB1-202ENST00000395354 EYA4O95677 639 aa21.39■■□□□ 1.01
LMNB1-202ENST00000395354 IDEP14735 1019 aa21.39■■□□□ 1.01
LMNB1-202ENST00000395354 KCNA2P16389 499 aa21.39■■□□□ 1.01
LMNB1-202ENST00000395354 TNFAIP2Q03169 654 aa21.39■■□□□ 1.01
LMNB1-202ENST00000395354 TMEM63BQ5T3F8 832 aa21.39■■□□□ 1.01
LMNB1-202ENST00000395354 TBC1D22BQ9NU19 505 aa21.39■■□□□ 1.01
LMNB1-202ENST00000395354 PANK4Q9NVE7 773 aa21.39■■□□□ 1.01
LMNB1-202ENST00000395354 FRMD3A2A2Y4 597 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 SSBP05455 408 aaKnown RBP eCLIP21.38■■□□□ 1.01
LMNB1-202ENST00000395354 SMPD1P17405 629 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 UBA1P22314 1058 aaKnown RBP21.38■■□□□ 1.01
LMNB1-202ENST00000395354 EEF1GP26641 437 aaKnown RBP21.38■■□□□ 1.01
LMNB1-202ENST00000395354 CCND3P30281 292 aaPredicted RBP21.38■■□□□ 1.01
LMNB1-202ENST00000395354 COASYQ13057 564 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 ITGB3BPQ13352 177 aaPredicted RBP21.38■■□□□ 1.01
LMNB1-202ENST00000395354 NEDD9Q14511 834 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 HSP90AA4PQ58FG1 418 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 TCP11X2Q5H9J9 407 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 CENPPQ6IPU0 288 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 BCAS3Q9H6U6 928 aa21.38■■□□□ 1.01
LMNB1-202ENST00000395354 DHX15O43143 795 aaKnown RBP21.37■■□□□ 1.01
LMNB1-202ENST00000395354 SLITRK3O94933 977 aa21.37■■□□□ 1.01
LMNB1-202ENST00000395354 AKR1A1P14550 325 aa21.37■■□□□ 1.01
LMNB1-202ENST00000395354 DUSP28Q4G0W2 176 aa21.37■■□□□ 1.01
LMNB1-202ENST00000395354 UNC45AQ9H3U1 944 aa21.37■■□□□ 1.01
LMNB1-202ENST00000395354 SLC39A2Q9NP94 309 aa21.37■■□□□ 1.01
LMNB1-202ENST00000395354 RTN4Q9NQC3 1192 aaKnown RBP21.37■■□□□ 1.01
LMNB1-202ENST00000395354 KCNJ18B7U540 433 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 SEPT4O43236 478 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 KIF20AO95235 890 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 PMS1P54277 932 aaKnown RBP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 KCNJ12Q14500 433 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 GJC2Q5T442 439 aaPredicted RBP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 SPECC1LQ69YQ0 1117 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 CYFIP1Q7L576 1253 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 FAM114A1Q8IWE2 563 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 COPS5Q92905 334 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 HMX1Q9NP08 348 aaPredicted RBP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 PYCARDQ9ULZ3 195 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 NFASCO94856 1347 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 TRIM49BA6NDI0 452 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 NKRFO15226 690 aaKnown RBP eCLIP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 ADCY6O43306 1168 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 NRDCO43847 1150 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 SORBS3O60504 671 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 GGPS1O95749 300 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 SFPQP23246 707 aaKnown RBP eCLIP21.36■■□□□ 1.011e-7■■■■■ 32.9
LMNB1-202ENST00000395354 PSMC6P62333 389 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 LRMPQ12912 555 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 TBX2Q13207 712 aaPredicted RBP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 KRT31Q15323 416 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 ARSHQ5FYA8 562 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 FAM26FQ5R3K3 315 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 CELF3Q5SZQ8 465 aaKnown RBP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 DHX37Q8IY37 1157 aaKnown RBP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 DYDC2Q96IM9 177 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 NACC1Q96RE7 527 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 DUSP9Q99956 384 aaKnown RBP21.36■■□□□ 1.01
LMNB1-202ENST00000395354 MLXIPQ9HAP2 919 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 SPTLC3Q9NUV7 552 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 RGL1Q9NZL6 768 aa21.36■■□□□ 1.01
LMNB1-202ENST00000395354 DDX39AO00148 427 aaKnown RBP21.35■■□□□ 1.01
LMNB1-202ENST00000395354 FGFR1OPO95684 399 aaKnown RBP21.35■■□□□ 1.01
LMNB1-202ENST00000395354 GH1P01241 217 aa21.35■■□□□ 1.01
LMNB1-202ENST00000395354 KRT18P05783 430 aaKnown RBP21.35■■□□□ 1.01
LMNB1-202ENST00000395354 CYP4A11Q02928 519 aa21.35■■□□□ 1.01
LMNB1-202ENST00000395354 LRRC63Q05C16 580 aa21.35■■□□□ 1.01
LMNB1-202ENST00000395354 ANKRD40Q6AI12 368 aa21.35■■□□□ 1.01
LMNB1-202ENST00000395354 IRF2BP1Q8IU81 584 aa21.35■■□□□ 1.01
LMNB1-202ENST00000395354 CSGALNACT2Q8N6G5 542 aa21.35■■□□□ 1.01
LMNB1-202ENST00000395354 SRRTQ9BXP5 876 aaKnown RBP21.35■■□□□ 1.01
LMNB1-202ENST00000395354 JPH1Q9HDC5 661 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-202ENST00000395354 MAGEC2Q9UBF1 373 aaPredicted RBP21.35■■□□□ 1.01
LMNB1-202ENST00000395354 GNEQ9Y223 722 aaKnown RBP21.35■■□□□ 1.01
LMNB1-202ENST00000395354 CHMP2AO43633 222 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 PBX1P40424 430 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 COPB1P53618 953 aaKnown RBP21.34■■□□□ 1.01
LMNB1-202ENST00000395354 GIT2Q14161 759 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 NOLC1Q14978 699 aaKnown RBP eCLIP21.34■■□□□ 1.01
LMNB1-202ENST00000395354 ARMCX5Q6P1M9 558 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 METTL7BQ6UX53 244 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 MYOCDQ8IZQ8 938 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 KCND2Q9NZV8 630 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 PCDHA2Q9Y5H9 948 aa21.34■■□□□ 1.01
LMNB1-202ENST00000395354 DYNC1LI2O43237 492 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-202ENST00000395354 FARP2O94887 1054 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-202ENST00000395354 CCZ1BP86790 482 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 CCZ1P86791 482 aaPredicted RBP21.33■■□□□ 1.01
LMNB1-202ENST00000395354 ARHGAP1Q07960 439 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 LAMC2Q13753 1193 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 CTTNQ14247 550 aaKnown RBP21.33■■□□□ 1.01
LMNB1-202ENST00000395354 ARID5BQ14865 1188 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 MIER3Q7Z3K6 550 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 TPH2Q8IWU9 490 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 CCDC112Q8NEF3 446 aa21.33■■□□□ 1.01
LMNB1-202ENST00000395354 HPS3Q969F9 1004 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms