RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 MTMR8Q96EF0 704 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 IWS1Q96ST2 819 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 TEKT3Q9BXF9 490 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 DIS3Q9Y2L1 958 aaKnown RBP12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
UBE2D3-209ENST00000394804 SART1O43290 800 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 GAS8O95995 478 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 MIER3Q7Z3K6 550 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 PNMA8AQ86V59 439 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 CCDC197Q8NCU1 140 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 HDAC7Q8WUI4 952 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 RUNDC3BQ96NL0 473 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 NACC1Q96RE7 527 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 VEZTQ9HBM0 779 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 INTS9Q9NV88 658 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 SFI1A8K8P3 1242 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 SLC26A4O43511 780 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 RPS6KA5O75582 802 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 ACTN1P12814 892 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 MIIPQ5JXC2 388 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 MAIP1Q8WWC4 291 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 ARL8AQ96BM9 186 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 EPN3Q9H201 632 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 LRRC4BQ9NT99 713 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 BLOC1S4Q9NUP1 217 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 SIK3Q9Y2K2 1263 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 MRPL11Q9Y3B7 192 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 SHANK3Q9BYB0 1731 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 PASKQ96RG2 1323 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 SYF2O95926 243 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 LSP1P33241 339 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 MDH1P40925 334 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 PPM1KQ8N3J5 372 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 CAVIN3Q969G5 261 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 PNMA5Q96PV4 448 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 WDR11Q9BZH6 1224 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.381e-7■■■■■ 61.1
UBE2D3-209ENST00000394804 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 GMNCA6NCL1 334 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 ATP2A1O14983 1001 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 MEFVO15553 781 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 GDF11O95390 407 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 CTTNQ14247 550 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 ZRSR2Q15696 482 aaKnown RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 FOXR1Q6PIV2 292 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 RHOT2Q8IXI1 618 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 TLR10Q9BXR5 811 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 RTFDC1Q9BY42 306 aaPredicted RBP12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 POLD4Q9HCU8 107 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 AMACRQ9UHK6 382 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 FBXL5Q9UKA1 691 aa12.66□□□□□ -0.38
UBE2D3-209ENST00000394804 PITPNM2Q9BZ72 1349 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 PJA2O43164 708 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 SLC9A1P19634 815 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 HOXA13P31271 388 aaPredicted RBP12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 PPP2R2AP63151 447 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 KLHDC7AQ5VTJ3 777 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 SPICE1Q8N0Z3 855 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 PIGOQ8TEQ8 1089 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 BAIAP2L1Q9UHR4 511 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 DAPK3O43293 454 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 PTK2Q05397 1052 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 LRIG3Q6UXM1 1119 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 CALR3Q96L12 384 aaKnown RBP12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 SNAP25P60880 206 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 MGARPQ8TDB4 240 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 RFFLQ8WZ73 363 aa12.65□□□□□ -0.38
UBE2D3-209ENST00000394804 HNRNPH3P31942 346 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 MAGOHP61326 146 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 WDR44Q5JSH3 913 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 CEP128Q6ZU80 1094 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 TMEM179Q6ZVK1 233 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 PSMD1Q99460 953 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 ISCUQ9H1K1 167 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 MYBL2P10244 700 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 LACTBP83111 547 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 DRAP1Q14919 205 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 SETDB1Q15047 1291 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 SNCBQ16143 134 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 GLYCTKQ8IVS8 523 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 ZNF473Q8WTR7 871 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 CCT8L2Q96SF2 557 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 ZNF577Q9BSK1 485 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 UBE2TQ9NPD8 197 aaPredicted RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 MIF4GDA9UHW6 222 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 CYP11B2P19099 503 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 CALRP27797 417 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 IFNAR2P48551 515 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 UBXN2AP68543 259 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 SLC20A2Q08357 652 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 INTS8Q75QN2 995 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 CASKIN2Q8WXE0 1202 aa12.64□□□□□ -0.39
UBE2D3-209ENST00000394804 RSRC1Q96IZ7 334 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms