RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 ADRA2BP18089 450 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 SMTNP53814 917 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 IRX3P78415 501 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 ACTN3Q08043 901 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 EPHA7Q15375 998 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 TRAPPC3LQ5T215 181 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 DAAM2Q86T65 1068 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 METTL13Q8N6R0 699 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 CTNNBL1Q8WYA6 563 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 PACSIN1Q9BY11 444 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 STMN4Q9H169 189 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 EHD4Q9H223 541 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 PARP2Q9UGN5 583 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 CCNL1Q9UK58 526 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 NENFQ9UMX5 172 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 PACSIN2Q9UNF0 486 aaPredicted RBP10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 QSER1Q2KHR3 1735 aa10.94□□□□□ -0.66
UBE2D3-208ENST00000394803 ZSCAN5CA6NGD5 496 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 NR3C1P04150 777 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 TMEM253P0C7T8 217 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 ERCC3P19447 782 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 JAM2P57087 298 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 IFFO1Q0D2I5 559 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 DHX34Q14147 1143 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 GIT2Q14161 759 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 NFIXQ14938 502 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 ENOX2Q16206 610 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 DCAF17Q5H9S7 520 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 MEX3CQ5U5Q3 659 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 TCERG1LQ5VWI1 586 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 CACNA2D3Q8IZS8 1091 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 RFFLQ8WZ73 363 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 ARHGEF1Q92888 912 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 CENPTQ96BT3 561 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 HES6Q96HZ4 224 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 RUNDC3BQ96NL0 473 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 POLR3CQ9BUI4 534 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 FAM129AQ9BZQ8 928 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 CARD9Q9H257 536 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 CENPHQ9H3R5 247 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 OLFML3Q9NRN5 406 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 GCNT4Q9P109 453 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 STXBP5LQ9Y2K9 1186 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 DAGLAQ9Y4D2 1042 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 TRAPPC3O43617 180 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 MUTP22033 750 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 HPDP32754 393 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 PSMC2P35998 433 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 FNTAP49354 379 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 ZNF844Q08AG5 666 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 GKAP1Q5VSY0 366 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 CYFIP2Q96F07 1278 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 NGLY1Q96IV0 654 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 MYCBPQ99417 103 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 NCAPGQ9BPX3 1015 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 SEL1LQ9UBV2 794 aa10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 GREB1LQ9C091 1923 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-208ENST00000394803 SPDYE3A6NKU9 549 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 H0YGN5 161 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 CHUKO15111 745 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 MED24O75448 989 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 SLC9A1P19634 815 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 ECHS1P30084 290 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 PICALMQ13492 652 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 CRY2Q49AN0 593 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 TMC3Q7Z5M5 1100 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 NT5DC3Q86UY8 548 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 SFR1Q86XK3 245 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 RHOT2Q8IXI1 618 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 PSMD1Q99460 953 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 FMO2Q99518 471 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 STK33Q9BYT3 514 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 SLC12A6Q9UHW9 1150 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 PCDHA1Q9Y5I3 950 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 NFS1Q9Y697 457 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 BTAF1O14981 1849 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 PFASO15067 1338 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 C5orf60A6NFR6 353 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 CCDC169A6NNP5 214 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 MIF4GDA9UHW6 222 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 USP17L10C9JJH3 530 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 PPP1R11O60927 126 aaPredicted RBP10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 EYA4O95677 639 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 GGPS1O95749 300 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 SOX5P35711 763 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 RNASE9P60153 205 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 PTENP60484 403 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 ARHGAP4P98171 946 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 SLC15A2Q16348 729 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 KRT71Q3SY84 523 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 ARSHQ5FYA8 562 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 C6orf89Q6UWU4 347 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 CATSPER3Q86XQ3 398 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 KAT2BQ92831 832 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 REEP2Q9BRK0 252 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 AMNQ9BXJ7 453 aa10.92□□□□□ -0.66
UBE2D3-208ENST00000394803 TAOK3Q9H2K8 898 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms