RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 ZSCAN5CA6NGD5 496 aaPredicted RBP17■□□□□ 0.31
PTBP1-204ENST00000394601 ECE2O60344 883 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 HSF2BPO75031 334 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 GCKP35557 465 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 RASSF7Q02833 373 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 ICA1Q05084 483 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 PRR16Q569H4 304 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
PTBP1-204ENST00000394601 SPATA4Q8NEY3 305 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 OLIG1Q8TAK6 271 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 KLC4Q9NSK0 619 aa17■□□□□ 0.31
PTBP1-204ENST00000394601 NNTQ13423 1086 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 CCDC40Q4G0X9 1142 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 LSM14BQ9BX40 385 aaKnown RBP16.99■□□□□ 0.31
PTBP1-204ENST00000394601 NENFQ9UMX5 172 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 ENO4A6NNW6 628 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 EML1O00423 815 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 MEIS1O00470 390 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 GNA14O95837 355 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 SERPING1P05155 500 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 MAGEA1P43355 309 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 BMT2Q1RMZ1 405 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 FAM43BQ6ZT52 329 aaPredicted RBP16.99■□□□□ 0.31
PTBP1-204ENST00000394601 THOC1Q96FV9 657 aaKnown RBP16.99■□□□□ 0.31
PTBP1-204ENST00000394601 TACO1Q9BSH4 297 aaKnown RBP16.99■□□□□ 0.31
PTBP1-204ENST00000394601 AMNQ9BXJ7 453 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 AKR1B10O60218 316 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 USO1O60763 962 aaKnown RBP16.99■□□□□ 0.31
PTBP1-204ENST00000394601 TACC1O75410 805 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 CYP3A4P08684 503 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 IRF2BP2Q7Z5L9 587 aa16.99■□□□□ 0.31
PTBP1-204ENST00000394601 TSEN2Q8NCE0 465 aaKnown RBP16.99■□□□□ 0.31
PTBP1-204ENST00000394601 RSPH10B2B2RC85 870 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 RSPH10BP0C881 870 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 ZBTB48P10074 688 aaPredicted RBP16.98■□□□□ 0.31
PTBP1-204ENST00000394601 POLR2FP61218 127 aaKnown RBP16.98■□□□□ 0.31
PTBP1-204ENST00000394601 ADAM9Q13443 819 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 RNF10Q8N5U6 811 aaKnown RBP16.98■□□□□ 0.31
PTBP1-204ENST00000394601 BORCS6Q96GS4 357 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 CCDC43Q96MW1 224 aaKnown RBP16.98■□□□□ 0.31
PTBP1-204ENST00000394601 HAUS2Q9NVX0 235 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 ASTN1O14525 1302 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 A0A087X0T9 212 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 FAM228BP0C875 321 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 MYBP10242 640 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 SATB1Q01826 763 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 PPP4R3CPQ6ZMV5 832 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 PNMA8AQ86V59 439 aaPredicted RBP16.98■□□□□ 0.31
PTBP1-204ENST00000394601 RNF217Q8TC41 542 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 AJAP1Q9UKB5 411 aaPredicted RBP16.98■□□□□ 0.31
PTBP1-204ENST00000394601 ZMYM2Q9UBW7 1377 aa16.98■□□□□ 0.31
PTBP1-204ENST00000394601 TULP1O00294 542 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 SARNPP82979 210 aaKnown RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 HLTFQ14527 1009 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 NAB2Q15742 525 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 SYDE2Q5VT97 1194 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 HAUS3Q68CZ6 603 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 RNPC3Q96LT9 517 aaKnown RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 RUSC1Q9BVN2 902 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 PACSIN1Q9BY11 444 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 SRCAPQ6ZRS2 3230 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 PLSCR1O15162 318 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 ACTN1P12814 892 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 KCNA1Q09470 495 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.318e-16■■□□□ 12.2
PTBP1-204ENST00000394601 SLC18A3Q16572 532 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 ABCB5Q2M3G0 1257 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 USH1GQ495M9 461 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 SFMBT2Q5VUG0 894 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 CCDC121Q6ZUS5 278 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 RBM46Q8TBY0 533 aaKnown RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 SIX2Q9NPC8 291 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 BMP2KQ9NSY1 1161 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 FAM184BQ9ULE4 1060 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 PCDHGC5Q9Y5F6 944 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 YDJCA8MPS7 323 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 CHUKO15111 745 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 MEFVO15553 781 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 BUB1O43683 1085 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 AKAP3O75969 853 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 KLRC1P26715 233 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 HOXA13P31271 388 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 KNOP1Q1ED39 458 aaKnown RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 SLC30A10Q6XR72 485 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 FBXO11Q86XK2 927 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 SFR1Q86XK3 245 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 PRMT6Q96LA8 375 aaPredicted RBP16.97■□□□□ 0.31
PTBP1-204ENST00000394601 FIZ1Q96SL8 496 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 HSD17B14Q9BPX1 270 aa16.97■□□□□ 0.31
PTBP1-204ENST00000394601 KIF4AO95239 1232 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 CPP00450 1065 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 CACNA2D4Q7Z3S7 1137 aa16.96■□□□□ 0.31
PTBP1-204ENST00000394601 FAM20AQ96MK3 541 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms