RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TRPC7Q9HCX4 862 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 ARID1BQ8NFD5 2236 aaPredicted RBP14.3□□□□□ -0.12
USP49-203ENST00000394253 ITGAXP20702 1163 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 IYDQ6PHW0 289 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 ARMCX6Q7L4S7 300 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 MRPL1Q9BYD6 325 aaKnown RBP14.3□□□□□ -0.12
USP49-203ENST00000394253 TUFT1Q9NNX1 390 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 ENO4A6NNW6 628 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 CCDC188H7C350 402 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 SYNCRIPO60506 623 aaKnown RBP14.3□□□□□ -0.12
USP49-203ENST00000394253 KRT1P04264 644 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 ATP8B4Q8TF62 1192 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 ADAM21Q9UKJ8 722 aa14.3□□□□□ -0.12
USP49-203ENST00000394253 TALDO1P37837 337 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 DNAJC24Q6P3W2 148 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 IFNL2Q8IZJ0 200 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 SPATA2Q9UM82 520 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 TROQ12816 1431 aaPredicted RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 TBKBP1A7MCY6 615 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 RGS5O15539 181 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 KLHL18O94889 574 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 GLG1Q92896 1179 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 PCDHA12Q9UN75 941 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 SNPHO15079 494 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 SLC35F6Q8N357 371 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 CARD9Q9H257 536 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 MYL1P05976 194 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 PTPROQ16827 1216 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 KLHL24Q6TFL4 600 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 CYP26B1Q9NR63 512 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 PLAAQ9Y263 795 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 RDH13Q8NBN7 331 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 SYNJ2BP-COX16A0A087WUM0 186 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 TARSL2A2RTX5 802 aaKnown RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 CLCN6P51797 869 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 ADAM9Q13443 819 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 SGSM1Q2NKQ1 1148 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 LRRC39Q96DD0 335 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 VPS50Q96JG6 964 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 MYLK2Q9H1R3 596 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 COX16Q9P0S2 106 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 V9GY48 417 aaPredicted RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 EPHB1P54762 984 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 HNRNPH2P55795 449 aaKnown RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 SARM1Q6SZW1 724 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 COG1Q8WTW3 980 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 NT5C1BQ96P26 610 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 RPAP3Q9H6T3 665 aaPredicted RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 KRCC1Q9NPI7 259 aaPredicted RBP14.29□□□□□ -0.12
USP49-203ENST00000394253 PDP2Q9P2J9 529 aa14.29□□□□□ -0.12
USP49-203ENST00000394253 E5RI56 91 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 CAPZA2P47755 286 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 NCF4Q15080 339 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 MDM1Q8TC05 714 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 PANX2Q96RD6 677 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 SENP1Q9P0U3 644 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 SERPINH1P50454 418 aaKnown RBP14.28□□□□□ -0.12
USP49-203ENST00000394253 CMTM5Q96DZ9 223 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 KIFC1Q9BW19 673 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 SLC27A2O14975 620 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 C16orf89Q6UX73 402 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 KCNV2Q8TDN2 545 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 TRIM54Q9BYV2 358 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 BLZF1Q9H2G9 400 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 RPRD1BQ9NQG5 326 aaKnown RBP14.28□□□□□ -0.12
USP49-203ENST00000394253 PDE5AO76074 875 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 POLGP54098 1239 aaPredicted RBP14.28□□□□□ -0.12
USP49-203ENST00000394253 SLFN12LQ6IEE8 588 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 MRPL48Q96GC5 212 aaKnown RBP14.28□□□□□ -0.12
USP49-203ENST00000394253 NLRP11P59045 1033 aaKnown RBP14.28□□□□□ -0.12
USP49-203ENST00000394253 DNAL1Q4LDG9 190 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 ANKS3Q6ZW76 656 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 STX12Q86Y82 276 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 LRRC59Q96AG4 307 aaKnown RBP14.28□□□□□ -0.12
USP49-203ENST00000394253 FBXL5Q9UKA1 691 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 C5orf58C9J3I9 102 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 TRIM24O15164 1050 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 PASD1Q8IV76 773 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 BBS7Q8IWZ6 715 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 STAG2Q8N3U4 1231 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 IL12RB1P42701 662 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 PPP2R2AP63151 447 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 TAB1Q15750 504 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 KSR2Q6VAB6 950 aa14.28□□□□□ -0.12
USP49-203ENST00000394253 RNF103O00237 685 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 GTPBP6O43824 516 aaPredicted RBP14.27□□□□□ -0.12
USP49-203ENST00000394253 KITP10721 976 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 MXD4Q14582 209 aaPredicted RBP14.27□□□□□ -0.12
USP49-203ENST00000394253 USH1GQ495M9 461 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 CLEC11AQ9Y240 323 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 ZBED4O75132 1171 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 ZMYND10O75800 440 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 SEC24DO94855 1032 aaPredicted RBP14.27□□□□□ -0.12
USP49-203ENST00000394253 TRAPPC10P48553 1259 aa14.27□□□□□ -0.12
USP49-203ENST00000394253 MAPRE1Q15691 268 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms