RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 GRM6O15303 877 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 MSH4O15457 936 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 MGEA5O60502 916 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 CTNNB1P35222 781 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 PAK2Q13177 524 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 PTPROQ16827 1216 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 TRMT1LQ7Z2T5 733 aaKnown RBP20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 SMAP1Q8IYB5 467 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 BANK1Q8NDB2 785 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 BICD2Q8TD16 824 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 BBXQ8WY36 941 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 ZNF274Q96GC6 653 aaPredicted RBP20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 AIFM3Q96NN9 605 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 FTHL17Q9BXU8 183 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 ERVK-5Q9HDB9 667 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 NOC2LQ9Y3T9 749 aaKnown RBP20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 PCDHA10Q9Y5I2 948 aa20.68■□□□□ 0.9
PDLIM7-205ENST00000393551 FNDC1Q4ZHG4 1894 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 KCNA5P22460 613 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 GATMP50440 423 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 USP11P51784 963 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 BTG3Q14201 252 aaPredicted RBP20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 COL19A1Q14993 1142 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 LEXMQ3ZCV2 418 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 TCEAL5Q5H9L2 206 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 CD320Q9NPF0 282 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 GABBR1Q9UBS5 961 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 GINS2Q9Y248 185 aa20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 MRPL42Q9Y6G3 142 aaKnown RBP20.67■□□□□ 0.9
PDLIM7-205ENST00000393551 ZNF862O60290 1169 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 GPR32O75388 356 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 RB1P06400 928 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 PSAPP07602 524 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 NLRP5P59047 1200 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 SSRP1Q08945 709 aaKnown RBP20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 CAMK1Q14012 370 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 TIGD5Q53EQ6 642 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 NPAS4Q8IUM7 802 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 NEK9Q8TD19 979 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 TBCKQ8TEA7 893 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 SLC5A5Q92911 643 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 KHSRPQ92945 711 aaKnown RBP eCLIP20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 PPP1R16BQ96T49 567 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 PCDHA4Q9UN74 947 aa20.66■□□□□ 0.9
PDLIM7-205ENST00000393551 VTNP04004 478 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 NFX1Q12986 1120 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 STK3Q13188 491 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 UGCGQ16739 394 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 KIZQ2M2Z5 673 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 CKAP2LQ8IYA6 745 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 LINC01465Q8N7H1 131 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 NSUN3Q9H649 340 aaKnown RBP20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 DISC1Q9NRI5 854 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 ST3GAL5Q9UNP4 418 aa20.65■□□□□ 0.9
PDLIM7-205ENST00000393551 DTNBO60941 627 aa20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 RPS6KA5O75582 802 aa20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 DEXIO95424 95 aa20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 TRIM22Q8IYM9 498 aa20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 CMTR2Q8IYT2 770 aaKnown RBP20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 RIT2Q99578 217 aa20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 OSMRQ99650 979 aa20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 C11orf84Q9BUA3 381 aaPredicted RBP20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 UNC45AQ9H3U1 944 aa20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
PDLIM7-205ENST00000393551 PLXNA4Q9HCM2 1894 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 CYP3A7-CYP3A51PA0A087WV96 503 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 WDR64B1ANS9 1081 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 PSMD10O75832 226 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 TDP2O95551 362 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 IL9P15248 144 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 CYP3A7P24462 503 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 DNAJB1P25685 340 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 LTBRP36941 435 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 CLCN3P51790 818 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 Q4G0T1 1027 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 PAN2Q504Q3 1202 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 B3GNT9Q6UX72 402 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 FAM228AQ86W67 206 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 METTL13Q8N6R0 699 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 PABPC5Q96DU9 382 aaKnown RBP20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 EPHX3Q9H6B9 360 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 PDRG1Q9NUG6 133 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 PLAGL2Q9UPG8 496 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 RWDD3Q9Y3V2 267 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 SAMM50Q9Y512 469 aa20.63■□□□□ 0.89
PDLIM7-205ENST00000393551 H3BQ06 376 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 CHMP2AO43633 222 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 SARSP49591 514 aaKnown RBP20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 CRYBB1P53674 252 aaPredicted RBP20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 SCRN1Q12765 414 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 BLIDQ8IZY5 108 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 LRRC71Q8N4P6 559 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 DAGLBQ8NCG7 672 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 MBOAT7Q96N66 472 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 ADAM2Q99965 735 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 PLVAPQ9BX97 442 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 LMAN2LQ9H0V9 348 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 RGS18Q9NS28 235 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 RAPGEFL1Q9UHV5 662 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms