RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.94
CASP4-201ENST00000393150 DDX49Q9Y6V7 483 aaKnown RBP9.21□□□□□ -0.94
CASP4-201ENST00000393150 TET1Q8NFU7 2136 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 TRIP12Q14669 1992 aaPredicted RBP9.2□□□□□ -0.94
CASP4-201ENST00000393150 SERTM1A2A2V5 107 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 SOWAHDA6NJG2 315 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 ST8SIA5O15466 376 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 BMPR1AP36894 532 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 SNAP25P60880 206 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 RPS6P62753 249 aaKnown RBP9.2□□□□□ -0.94
CASP4-201ENST00000393150 COL19A1Q14993 1142 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 STXBP2Q15833 593 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 SYDE2Q5VT97 1194 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 TMEM214Q6NUQ4 689 aaKnown RBP9.2□□□□□ -0.94
CASP4-201ENST00000393150 CEP85Q6P2H3 762 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 SND1Q7KZF4 910 aaKnown RBP eCLIP9.2□□□□□ -0.94
CASP4-201ENST00000393150 NSUN6Q8TEA1 469 aaKnown RBP9.2□□□□□ -0.94
CASP4-201ENST00000393150 NKD2Q969F2 451 aaPredicted RBP9.2□□□□□ -0.94
CASP4-201ENST00000393150 ZFP42Q96MM3 310 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 IWS1Q96ST2 819 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 FSD1Q9BTV5 496 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 PLVAPQ9BX97 442 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 NIFKQ9BYG3 293 aaKnown RBP9.2□□□□□ -0.94
CASP4-201ENST00000393150 MAF1Q9H063 256 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 NAPBQ9H115 298 aa9.2□□□□□ -0.94
CASP4-201ENST00000393150 BAZ2AQ9UIF9 1905 aaKnown RBP9.2□□□□□ -0.94
CASP4-201ENST00000393150 FAM186AA6NE01 2351 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 GSG1L2A8MUP6 293 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 PROB1E7EW31 1015 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 H0Y858 1186 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 RANBP6O60518 1105 aaKnown RBP9.19□□□□□ -0.94
CASP4-201ENST00000393150 CAND2O75155 1236 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 PPFIA4O75335 1185 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 ZNF211Q13398 564 aaPredicted RBP9.19□□□□□ -0.94
CASP4-201ENST00000393150 NAALADL2Q58DX5 795 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 PLEKHG4Q58EX7 1191 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 KCNV1Q6PIU1 500 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 MCF2L2Q86YR7 1114 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 MICAL1Q8TDZ2 1067 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 APPBP2Q92624 585 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 ANKS1AQ92625 1134 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 COPS5Q92905 334 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 RPGRIP1Q96KN7 1286 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 PHF7Q9BWX1 381 aaPredicted RBP9.19□□□□□ -0.94
CASP4-201ENST00000393150 RANBP17Q9H2T7 1088 aaKnown RBP9.19□□□□□ -0.94
CASP4-201ENST00000393150 MFSD1Q9H3U5 465 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 TLR9Q9NR96 1032 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 EGFL7Q9UHF1 273 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 MRVI1Q9Y6F6 885 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 SCN10AQ9Y5Y9 1956 aa9.19□□□□□ -0.94
CASP4-201ENST00000393150 COL4A4P53420 1690 aaPredicted RBP9.19□□□□□ -0.94
CASP4-201ENST00000393150 CFAP54Q96N23 3096 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 SIP14410 1827 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 USP34Q70CQ2 3546 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 C17orf102A2RUQ5 167 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 NFIBO00712 420 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 RNF113AO15541 343 aaKnown RBP9.18□□□□□ -0.94
CASP4-201ENST00000393150 GPAA1O43292 621 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 EYA4O95677 639 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 LTBRP36941 435 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 TXLNAP40222 546 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 HYAL1Q12794 435 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 BTG3Q14201 252 aaPredicted RBP9.18□□□□□ -0.94
CASP4-201ENST00000393150 LY6KQ17RY6 165 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 COX20Q5RI15 118 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 ARHGEF16Q5VV41 709 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 PRICKLE2Q7Z3G6 844 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 RGS22Q8NE09 1264 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 PPTC7Q8NI37 304 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 KCNG4Q8TDN1 519 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 ATP6V0A1Q93050 837 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 MYO19Q96H55 970 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 ANO2Q9NQ90 1003 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 INCENPQ9NQS7 918 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 TOMM22Q9NS69 142 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 LRFN2Q9ULH4 789 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 NR2E1Q9Y466 385 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 TECTAO75443 2155 aa9.18□□□□□ -0.94
CASP4-201ENST00000393150 TTLL8A6PVC2 850 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 LOC730098B7Z3J9 87 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 C5orf67F2Z3F1 127 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 ICMTO60725 284 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 EIF3JO75822 258 aaKnown RBP9.17□□□□□ -0.94
CASP4-201ENST00000393150 CSPG5O95196 566 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 EDNRBP24530 442 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 ICAM3P32942 547 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 POU4F2Q12837 409 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 COASYQ13057 564 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 ADAM15Q13444 863 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 MTMR3Q13615 1198 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 GPNMBQ14956 572 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 SLC30A10Q6XR72 485 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 RSPH3Q86UC2 560 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 UBALD2Q8IYN6 164 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 IFNL3Q8IZI9 196 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 EFHBQ8N7U6 833 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 DHX38Q92620 1227 aaKnown RBP9.17□□□□□ -0.94
CASP4-201ENST00000393150 RMDN3Q96TC7 470 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 ATP13A2Q9NQ11 1180 aa9.17□□□□□ -0.94
CASP4-201ENST00000393150 MYO7AQ13402 2215 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms