RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 PHBP35232 272 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 ADGRA1Q86SQ6 560 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 XXYLT1Q8NBI6 393 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 PBKQ96KB5 322 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 WDR46O15213 610 aaKnown RBP17.94■□□□□ 0.46
SCN3B-202ENST00000392770 KCNB1Q14721 858 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 CAPN12Q6ZSI9 719 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 MAGOHBQ96A72 148 aaKnown RBP17.94■□□□□ 0.46
SCN3B-202ENST00000392770 NBPF3Q9H094 633 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 ADAMTS1Q9UHI8 967 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 DENND3A2RUS2 1198 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 ZSCAN20P17040 1043 aaPredicted RBP17.94■□□□□ 0.46
SCN3B-202ENST00000392770 MNAT1P51948 309 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 SNX1Q13596 522 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 NEDD9Q14511 834 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 DNAJC24Q6P3W2 148 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 ANKRD42Q8N9B4 389 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
SCN3B-202ENST00000392770 TUFT1Q9NNX1 390 aa17.94■□□□□ 0.46
SCN3B-202ENST00000392770 NME8Q8N427 588 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 MYOZ2Q9NPC6 264 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 KRT1P04264 644 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 GCLMP48507 274 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 SMAP1Q8IYB5 467 aaPredicted RBP17.93■□□□□ 0.46
SCN3B-202ENST00000392770 BBOF1Q8ND07 529 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 FAM49AQ9H0Q0 323 aaPredicted RBP17.93■□□□□ 0.46
SCN3B-202ENST00000392770 ELP3Q9H9T3 547 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 SARNPP82979 210 aaKnown RBP17.93■□□□□ 0.46
SCN3B-202ENST00000392770 GUF1Q8N442 669 aaKnown RBP17.93■□□□□ 0.46
SCN3B-202ENST00000392770 MRPL47Q9HD33 250 aaKnown RBP17.93■□□□□ 0.46
SCN3B-202ENST00000392770 PRR12Q9ULL5 1215 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 HIP1RO75146 1068 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 EPHA7Q15375 998 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 UHMK1Q8TAS1 419 aaKnown RBP17.93■□□□□ 0.46
SCN3B-202ENST00000392770 FAM213AQ9BRX8 229 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 TMEM39BQ9GZU3 492 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 HAUS2Q9NVX0 235 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 CCDC13Q8IYE1 715 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 CCSER1Q9C0I3 900 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 EPB41L5Q9HCM4 733 aa17.93■□□□□ 0.46
SCN3B-202ENST00000392770 SCAF8Q9UPN6 1271 aaKnown RBP17.93■□□□□ 0.46
SCN3B-202ENST00000392770 H7C0C1 242 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 HEXIM1O94992 359 aaKnown RBP17.92■□□□□ 0.46
SCN3B-202ENST00000392770 EYA4O95677 639 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 ATP5OP48047 213 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 GFPT1Q06210 699 aaPredicted RBP17.92■□□□□ 0.46
SCN3B-202ENST00000392770 CEP55Q53EZ4 464 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 ANKRD40Q6AI12 368 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 ALKBH5Q6P6C2 394 aaKnown RBP17.92■□□□□ 0.46
SCN3B-202ENST00000392770 CTAGE3PQ8IX95 158 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 THNSL1Q8IYQ7 743 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 HEXIM2Q96MH2 286 aaKnown RBP17.92■□□□□ 0.46
SCN3B-202ENST00000392770 SEL1LQ9UBV2 794 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 SGK1O00141 431 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 MAN1A1P33908 653 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 PDZD4Q76G19 769 aaPredicted RBP17.92■□□□□ 0.46
SCN3B-202ENST00000392770 ODF2LQ9ULJ1 636 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 SEMA3FQ13275 785 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 MAP7D3Q8IWC1 876 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 CCDC110Q8TBZ0 833 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 HPS3Q969F9 1004 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 RGL1Q9NZL6 768 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 LPXNO60711 386 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 METTL23Q86XA0 190 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 LPAR1Q92633 364 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 FAM114A2Q9NRY5 505 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 CRCPO75575 148 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 GBP1P32455 592 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 SGO2Q562F6 1265 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 PDE11AQ9HCR9 933 aa17.92■□□□□ 0.46
SCN3B-202ENST00000392770 CLDN3O15551 220 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 TTLL4Q14679 1199 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 TCRBV5S4A2TA0A5A2 114 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 ANGEL2Q5VTE6 544 aaKnown RBP17.91■□□□□ 0.46
SCN3B-202ENST00000392770 TXNRD3Q86VQ6 643 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 VAMP7P51809 220 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
SCN3B-202ENST00000392770 SLC9A2Q9UBY0 812 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 FMR1Q06787 632 aaKnown RBP eCLIP17.91■□□□□ 0.46
SCN3B-202ENST00000392770 GEN1Q17RS7 908 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 KIAA1586Q9HCI6 787 aa17.91■□□□□ 0.46
SCN3B-202ENST00000392770 YWHABP31946 246 aaKnown RBP17.9■□□□□ 0.46
SCN3B-202ENST00000392770 GMPSP49915 693 aaPredicted RBP17.9■□□□□ 0.46
SCN3B-202ENST00000392770 C7orf31Q8N865 590 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 SPATA33Q96N06 139 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 TRIM9Q9C026 710 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 ZMYND12Q9H0C1 365 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 INTS2Q9H0H0 1204 aaKnown RBP17.9■□□□□ 0.46
SCN3B-202ENST00000392770 VCPKMTQ9H867 229 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 RTFDC1Q9BY42 306 aaPredicted RBP17.9■□□□□ 0.46
SCN3B-202ENST00000392770 MON2Q7Z3U7 1717 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 SMARCA1P28370 1054 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 LMNB2Q03252 620 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 SF3A3Q12874 501 aaKnown RBP eCLIP17.9■□□□□ 0.46
SCN3B-202ENST00000392770 MAPK6Q16659 721 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 ABI1Q8IZP0 508 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 ZNF280CQ8ND82 737 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 GNGT1P63211 74 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 RHPN2Q8IUC4 686 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 DPF2Q92785 391 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms