RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 DEFB103AP81534 67 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 PRKCEQ02156 737 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 LPIN1Q14693 890 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 UGCGQ16739 394 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 FBXO47Q5MNV8 452 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 TRMT1LQ7Z2T5 733 aaKnown RBP13.32□□□□□ -0.28
RFC4-202ENST00000392481 POTEDQ86YR6 584 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 SLFN12Q8IYM2 578 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 KIAA0319LQ8IZA0 1049 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 CDX2Q99626 313 aaPredicted RBP13.32□□□□□ -0.28
RFC4-202ENST00000392481 IFIH1Q9BYX4 1025 aaKnown RBP13.32□□□□□ -0.28
RFC4-202ENST00000392481 NKX2-4Q9H2Z4 354 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
RFC4-202ENST00000392481 KIF3AQ9Y496 699 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 GTF3C3Q9Y5Q9 886 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 TRPV2Q9Y5S1 764 aa13.32□□□□□ -0.28
RFC4-202ENST00000392481 CD2BP2O95400 341 aaKnown RBP13.31□□□□□ -0.28
RFC4-202ENST00000392481 GHRP10912 638 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 MYOGP15173 224 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 XKR3Q5GH77 459 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 TSHZ1Q6ZSZ6 1077 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 USP38Q8NB14 1042 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 CELF4Q9BZC1 486 aaKnown RBP13.31□□□□□ -0.28
RFC4-202ENST00000392481 KDM3AQ9Y4C1 1321 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 PTPRSQ13332 1948 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 SIP14410 1827 aa13.31□□□□□ -0.28
RFC4-202ENST00000392481 EML1O00423 815 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 TLL1O43897 1013 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 GJB5O95377 273 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 AMHP03971 560 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 PSMC5P62195 406 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 TMEM62Q0P6H9 643 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 GRIN2CQ14957 1233 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 CALCRLQ16602 461 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 PPP2R2DQ66LE6 453 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.3□□□□□ -0.283e-11■□□□□ 10.5
RFC4-202ENST00000392481 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 ZBED2Q9BTP6 218 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 NIFKQ9BYG3 293 aaKnown RBP13.3□□□□□ -0.28
RFC4-202ENST00000392481 A0A0C4DFX4 3053 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 RBAK-RBAKDNI3L0D1 243 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 WNT7AO00755 349 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 NEMFO60524 1076 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 DKC1O60832 514 aaKnown RBP eCLIP13.3□□□□□ -0.289e-38■■■■■ 37.8
RFC4-202ENST00000392481 STBD1O95210 358 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 P4HBP07237 508 aaKnown RBP13.3□□□□□ -0.28
RFC4-202ENST00000392481 CA3P07451 260 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 TMOD1P28289 359 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 QARSP47897 775 aaKnown RBP13.3□□□□□ -0.28
RFC4-202ENST00000392481 SPIRE1Q08AE8 756 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 EPHA7Q15375 998 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
RFC4-202ENST00000392481 FAM43BQ6ZT52 329 aaPredicted RBP13.3□□□□□ -0.28
RFC4-202ENST00000392481 TMCO2Q7Z6W1 182 aaPredicted RBP13.3□□□□□ -0.28
RFC4-202ENST00000392481 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 MYOCDQ8IZQ8 938 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 BANK1Q8NDB2 785 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 MYLIPQ8WY64 445 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 RAD9AQ99638 391 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 AGO3Q9H9G7 860 aaKnown RBP13.3□□□□□ -0.28
RFC4-202ENST00000392481 PCDHA12Q9UN75 941 aa13.3□□□□□ -0.28
RFC4-202ENST00000392481 LOXHD1Q8IVV2 1947 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.29□□□□□ -0.28
RFC4-202ENST00000392481 DDX11L8A8MPP1 907 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 U2AF2P26368 475 aaKnown RBP eCLIP13.29□□□□□ -0.284e-7■■□□□ 12.4
RFC4-202ENST00000392481 TRAPPC10P48553 1259 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 TBC1D8BQ0IIM8 1120 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 ORC2Q13416 577 aaPredicted RBP13.29□□□□□ -0.28
RFC4-202ENST00000392481 GNL2Q13823 731 aaKnown RBP13.29□□□□□ -0.28
RFC4-202ENST00000392481 EFCAB12Q6NXP0 572 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 LINC01465Q8N7H1 131 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 MTMR9Q96QG7 549 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 MAP7D2Q96T17 732 aa13.29□□□□□ -0.28
RFC4-202ENST00000392481 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
RFC4-202ENST00000392481 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 CD52P31358 61 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 MCM7P33993 719 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 CLCN3P51790 818 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
RFC4-202ENST00000392481 TAP1Q03518 808 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 NCAPH2Q6IBW4 605 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 ANO5Q75V66 913 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 C4orf19Q8IY42 314 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 TOP1MTQ969P6 601 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 CEP89Q96ST8 783 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 FTHL17Q9BXU8 183 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 PRDM12Q9H4Q4 367 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 TTC12Q9H892 705 aaPredicted RBP13.28□□□□□ -0.28
RFC4-202ENST00000392481 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 GINS2Q9Y248 185 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 PRUNE2Q8WUY3 3088 aa13.28□□□□□ -0.28
RFC4-202ENST00000392481 TTC3P53804 2025 aa13.27□□□□□ -0.28
RFC4-202ENST00000392481 TMEM150BA6NC51 233 aa13.27□□□□□ -0.29
RFC4-202ENST00000392481 ENPP3O14638 875 aa13.27□□□□□ -0.29
RFC4-202ENST00000392481 GPR32O75388 356 aa13.27□□□□□ -0.29
RFC4-202ENST00000392481 VTNP04004 478 aa13.27□□□□□ -0.29
RFC4-202ENST00000392481 FOSL2P15408 326 aa13.27□□□□□ -0.29
RFC4-202ENST00000392481 TXKP42681 527 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms