RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 MPHOSPH6Q99547 160 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 NAA15Q9BXJ9 866 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 BCAS3Q9H6U6 928 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 DNAJC25-GNG10A0A024R161 153 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 MAPTP10636 758 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 FECHP22830 423 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 FXR1P51114 621 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 ACTR2P61160 394 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 SP2Q02086 613 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 TBC1D8BQ0IIM8 1120 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 FKBP15Q5T1M5 1219 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 ABHD15Q6UXT9 468 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 FAM178BQ8IXR5 827 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 C2orf69Q8N8R5 385 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCDC43Q96MW1 224 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 NDST4Q9H3R1 872 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 R3HDMLQ9H3Y0 253 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 POLD4Q9HCU8 107 aa12.63□□□□□ -0.39
SMARCAL1-203ENST00000392128 CETN3O15182 167 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 NKRFO15226 690 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 NMT1P30419 496 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 ADAM9Q13443 819 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 KCTD2Q14681 263 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 NFIL3Q16649 462 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 ODR4Q5SWX8 454 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 MIS18BP1Q6P0N0 1132 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 CPLX3Q8WVH0 158 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 FGD4Q96M96 766 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 MMP19Q99542 508 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 NUP58Q9BVL2 599 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 GABBR1Q9UBS5 961 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 TRPM7Q96QT4 1865 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 LOC102724159A0A0B4J2E5 919 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 BACH1O14867 736 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 CELF2O95319 508 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 ATG7O95352 703 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 NR2F2P24468 414 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 PWP2Q15269 919 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCDC40Q4G0X9 1142 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 SEPT14Q6ZU15 432 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 ANO5Q75V66 913 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 OTUD6AQ7L8S5 288 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 ANKRD23Q86SG2 305 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 IQCDQ96DY2 449 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 STRA6Q9BX79 667 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 LARSQ9P2J5 1176 aaKnown RBP12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 ZMYM2Q9UBW7 1377 aa12.62□□□□□ -0.39
SMARCAL1-203ENST00000392128 PLXNB2O15031 1838 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCL15-CCL14A0A0B4J2E2 113 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 USP27XA6NNY8 438 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 BTBD19C9JJ37 291 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 PDHXO00330 501 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCP110O43303 1012 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 USO1O60763 962 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 PPP1R37O75864 691 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 STBD1O95210 358 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 SUPT20HL2P0C7V6 817 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 ZBTB48P10074 688 aaPredicted RBP12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 TGFB3P10600 412 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CYP2C8P10632 490 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 ALCAMQ13740 583 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 SYCP1Q15431 976 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCL15Q16663 113 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 XKR9Q5GH70 373 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 FIGNQ5HY92 759 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 DNTTIP2Q5QJE6 756 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 UTP14CQ5TAP6 766 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 TTYH3Q9C0H2 523 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 ABHD10Q9NUJ1 306 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CAPN11Q9UMQ6 739 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 IGSF9BQ9UPX0 1349 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 TGFB1I1O43294 461 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 ZNF862O60290 1169 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 PLS3P13797 630 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 RPL13P26373 211 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCNA1P78396 465 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 PLA2G4FQ68DD2 849 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 SWSAP1Q6NVH7 229 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CYFIP1Q7L576 1253 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 CCDC60Q8IWA6 550 aaPredicted RBP12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 TRIM59Q8IWR1 403 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 GPRC5AQ8NFJ5 357 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 BRI3BPQ8WY22 251 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 PLXNA1Q9UIW2 1896 aa12.61□□□□□ -0.39
SMARCAL1-203ENST00000392128 TTC26A0AVF1 554 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 TMEM150BA6NC51 233 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 RNF225M0QZC1 329 aaPredicted RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 SLC16A3O15427 465 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 NR3C1P04150 777 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 PGK2P07205 417 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 UBA1P22314 1058 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 KCNA1Q09470 495 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 NEDD9Q14511 834 aa12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 ZC2HC1CQ53FD0 456 aaPredicted RBP12.6□□□□□ -0.39
SMARCAL1-203ENST00000392128 SPRYD7Q5W111 196 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms