RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 ATXN2Q99700 1313 aaKnown RBP17.76■□□□□ 0.43
TNIP1-202ENST00000389378 CHUKO15111 745 aa17.76■□□□□ 0.43
TNIP1-202ENST00000389378 BUB1BO60566 1050 aaPredicted RBP17.76■□□□□ 0.43
TNIP1-202ENST00000389378 CTNND1O60716 968 aaKnown RBP17.76■□□□□ 0.43
TNIP1-202ENST00000389378 ECM2O94769 699 aaPredicted RBP17.76■□□□□ 0.43
TNIP1-202ENST00000389378 MRPL12P52815 198 aaKnown RBP17.76■□□□□ 0.43
TNIP1-202ENST00000389378 ORC2Q13416 577 aaPredicted RBP17.76■□□□□ 0.43
TNIP1-202ENST00000389378 ANKRD20A8PQ5CZ79 823 aa17.76■□□□□ 0.43
TNIP1-202ENST00000389378 FAM182BQ5T319 152 aa17.76■□□□□ 0.43
TNIP1-202ENST00000389378 CD209Q9NNX6 404 aa17.76■□□□□ 0.43
TNIP1-202ENST00000389378 SPDYE3A6NKU9 549 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 F8VZ95 297 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 PLTPP55058 493 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 IFI16Q16666 785 aaKnown RBP17.75■□□□□ 0.43
TNIP1-202ENST00000389378 CYB5D1Q6P9G0 228 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 NT5DC3Q86UY8 548 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 CATSPER3Q86XQ3 398 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 CCDC26Q8TAB7 109 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 PAGR1Q9BTK6 254 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 SNX24Q9Y343 169 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 IGSF9BQ9UPX0 1349 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 GPR75-ASB3A0A0A6YYF3 556 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 SLCO1A2P46721 670 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 GPSM2P81274 684 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 BIRC3Q13489 604 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 SHROOM1Q2M3G4 852 aaPredicted RBP17.75■□□□□ 0.43
TNIP1-202ENST00000389378 FUKQ8N0W3 1084 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 ERVK-5Q9HDB9 667 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 TMOD4Q9NZQ9 345 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 GCNT3O95395 438 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 SCTRP47872 440 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 MARSP56192 900 aaKnown RBP17.75■□□□□ 0.43
TNIP1-202ENST00000389378 KNOP1Q1ED39 458 aaKnown RBP17.75■□□□□ 0.43
TNIP1-202ENST00000389378 ASPRV1Q53RT3 343 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 GKAP1Q5VSY0 366 aaPredicted RBP17.75■□□□□ 0.43
TNIP1-202ENST00000389378 FMO2Q99518 471 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 CCDC113Q9H0I3 377 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.75■□□□□ 0.439e-7■■■■■ 65.5
TNIP1-202ENST00000389378 GGT7Q9UJ14 662 aa17.75■□□□□ 0.43
TNIP1-202ENST00000389378 SPATA31A1Q5TZJ5 1347 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 ZBTB48P10074 688 aaPredicted RBP17.74■□□□□ 0.43
TNIP1-202ENST00000389378 POLD1P28340 1107 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 SLC12A3P55017 1021 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 ZNF543Q08ER8 600 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 GIT2Q14161 759 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 SEPT2Q15019 361 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 ARHGAP27Q6ZUM4 889 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 PARP9Q8IXQ6 854 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 GIMAP7Q8NHV1 300 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 SLC35G2Q8TBE7 412 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 PSMD1Q99460 953 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 AMFRQ9UKV5 643 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 LAMB2P55268 1798 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 CCDC172P0C7W6 258 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 KRT13P13646 458 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 IFNAR2P48551 515 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 FAM228AQ86W67 206 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 KIRREL3Q8IZU9 778 aa17.74■□□□□ 0.43
TNIP1-202ENST00000389378 LNX1Q8TBB1 728 aaPredicted RBP17.74■□□□□ 0.43
TNIP1-202ENST00000389378 KDM3AQ9Y4C1 1321 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 FRMD3A2A2Y4 597 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 TMEM110-MUSTN1A8MSY1 372 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 EVI5O60447 810 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 NR3C1P04150 777 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 SMARCA1P28370 1054 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 DDR1Q08345 913 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 EPHA7Q15375 998 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 DCAF12L1Q5VU92 463 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 VPS36Q86VN1 386 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 HVCN1Q96D96 273 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 TBC1D31Q96DN5 1066 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 MTFR1LQ9H019 292 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 SIX2Q9NPC8 291 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 TAS2R14Q9NYV8 317 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 TPX2Q9ULW0 747 aaKnown RBP17.73■□□□□ 0.43
TNIP1-202ENST00000389378 MTMR3Q13615 1198 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 ARHGAP44Q17R89 818 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 C1orf131Q8NDD1 294 aaKnown RBP17.73■□□□□ 0.43
TNIP1-202ENST00000389378 TATDN2Q93075 761 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 CALR3Q96L12 384 aaKnown RBP17.73■□□□□ 0.43
TNIP1-202ENST00000389378 BHMT2Q9H2M3 363 aa17.73■□□□□ 0.43
TNIP1-202ENST00000389378 CCDC188H7C350 402 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 CHN1P15882 459 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 CLK2P49760 499 aaKnown RBP17.72■□□□□ 0.43
TNIP1-202ENST00000389378 IFI35P80217 286 aaPredicted RBP17.72■□□□□ 0.43
TNIP1-202ENST00000389378 SNCBQ16143 134 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 EDRF1Q3B7T1 1238 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 PALB2Q86YC2 1186 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 RDH13Q8NBN7 331 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 SLC35C1Q96A29 364 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 ARHGEF26Q96DR7 871 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 DDX4Q9NQI0 724 aaKnown RBP17.72■□□□□ 0.43
TNIP1-202ENST00000389378 STXBP5LQ9Y2K9 1186 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 PCDHA1Q9Y5I3 950 aa17.72■□□□□ 0.43
TNIP1-202ENST00000389378 BZW2Q9Y6E2 419 aaKnown RBP17.72■□□□□ 0.43
TNIP1-202ENST00000389378 DDX60LQ5H9U9 1706 aaKnown RBP17.72■□□□□ 0.43
TNIP1-202ENST00000389378 CCDC38Q502W7 563 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms