RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CWC27Q6UX04 472 aaKnown RBP11.08□□□□□ -0.64
IFT88-203ENST00000389373 CYB5R4Q7L1T6 521 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 TMEM87AQ8NBN3 555 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 RASGRP4Q8TDF6 673 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 TNPO1Q92973 898 aaKnown RBP11.08□□□□□ -0.64
IFT88-203ENST00000389373 NECTIN4Q96NY8 510 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 ADAM7Q9H2U9 754 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 AZI2Q9H6S1 392 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 CNNM2Q9H8M5 875 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 CDHR5Q9HBB8 845 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 ERVK-5Q9HDB9 667 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 NGRNQ9NPE2 291 aaKnown RBP11.08□□□□□ -0.64
IFT88-203ENST00000389373 RGS18Q9NS28 235 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 FBXL21Q9UKT6 434 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 LZTS1Q9Y250 596 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 NOC2LQ9Y3T9 749 aaKnown RBP11.08□□□□□ -0.64
IFT88-203ENST00000389373 PCDHA2Q9Y5H9 948 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 FRMPD4Q14CM0 1322 aa11.08□□□□□ -0.64
IFT88-203ENST00000389373 CYTH3O43739 400 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 PDE4AP27815 886 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 ITIH3Q06033 890 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 GRM4Q14833 912 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 SEC23AQ15436 765 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 CWF19L1Q69YN2 538 aaKnown RBP11.07□□□□□ -0.64
IFT88-203ENST00000389373 XRRA1Q6P2D8 792 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 KCNT2Q6UVM3 1135 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 SLC24A5Q71RS6 500 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 NME8Q8N427 588 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 GPRASP2Q96D09 838 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 ZNF558Q96NG5 402 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 PCYT2Q99447 389 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 C1orf112Q9NSG2 853 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 ST3GAL5Q9UNP4 418 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
IFT88-203ENST00000389373 SMIM35A0A1B0GVV1 85 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 C9IYK1 514 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 IFIT3O14879 490 aaKnown RBP11.06□□□□□ -0.64
IFT88-203ENST00000389373 CXCL14O95715 111 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 LMNAP02545 664 aaKnown RBP11.06□□□□□ -0.64
IFT88-203ENST00000389373 ITGB5P18084 799 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 RFX1P22670 979 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 KLRC1P26715 233 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 MTMR1Q13613 665 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
IFT88-203ENST00000389373 ATAT1Q5SQI0 421 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 ODR4Q5SWX8 454 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 MTHFD1LQ6UB35 978 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 CCDC105Q8IYK2 499 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 ZDHHC14Q8IZN3 488 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 PLCD3Q8N3E9 789 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 DTWD2Q8NBA8 298 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 RIN2Q8WYP3 895 aaPredicted RBP11.06□□□□□ -0.64
IFT88-203ENST00000389373 RTP3Q9BQQ7 232 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 DIAPH3Q9NSV4 1193 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 SPG21Q9NZD8 308 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 R4GN57 208 aa11.06□□□□□ -0.64
IFT88-203ENST00000389373 ERICH2A1L162 156 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 NT5C1B-RDH14C9J2C7 533 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 MEIS2O14770 477 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 GPR182O15218 404 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 CLASP2O75122 1294 aaKnown RBP11.05□□□□□ -0.64
IFT88-203ENST00000389373 NPR3P17342 541 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 AOC1P19801 751 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 STAT5BP51692 787 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 LRRC55Q6ZSA7 311 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 SIX5Q8N196 739 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 MRPL43Q8N983 215 aaKnown RBP11.05□□□□□ -0.64
IFT88-203ENST00000389373 RNF169Q8NCN4 708 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 TMEM40Q8WWA1 233 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 CNTNAP3BQ96NU0 1288 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 CNTNAP3Q9BZ76 1288 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 TMEM117Q9H0C3 514 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 SENP2Q9HC62 589 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 CYP26B1Q9NR63 512 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 TMEM161AQ9NX61 479 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 SLC9A2Q9UBY0 812 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 KDM3AQ9Y4C1 1321 aa11.05□□□□□ -0.64
IFT88-203ENST00000389373 C2orf71A6NGG8 1288 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 EOMESO95936 686 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 PPM1AP35813 382 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 METAP2P50579 478 aaKnown RBP eCLIP11.04□□□□□ -0.64
IFT88-203ENST00000389373 TRDNQ13061 729 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 PUM1Q14671 1186 aaKnown RBP eCLIP11.04□□□□□ -0.64
IFT88-203ENST00000389373 BMS1Q14692 1282 aaKnown RBP11.04□□□□□ -0.64
IFT88-203ENST00000389373 WTAPQ15007 396 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 KIAA1841Q6NSI8 718 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 TRMT1LQ7Z2T5 733 aaKnown RBP11.04□□□□□ -0.64
IFT88-203ENST00000389373 TICAM2Q86XR7 235 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 CYP2W1Q8TAV3 490 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 AUTS2Q8WXX7 1259 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 ACSF2Q96CM8 615 aaPredicted RBP11.04□□□□□ -0.64
IFT88-203ENST00000389373 RRP36Q96EU6 259 aaKnown RBP11.04□□□□□ -0.64
IFT88-203ENST00000389373 CASD1Q96PB1 797 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 OSMRQ99650 979 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 DSCC1Q9BVC3 393 aa11.04□□□□□ -0.64
IFT88-203ENST00000389373 LNPKQ9C0E8 428 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms