RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 SV2BQ7L1I2 683 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 KRT26Q7Z3Y9 468 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 ATP6V1G3Q96LB4 118 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 P2RX7Q99572 595 aaKnown RBP9.79□□□□□ -0.84
GPNMB-202ENST00000381990 TLR10Q9BXR5 811 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 ACTR5Q9H9F9 607 aaPredicted RBP9.79□□□□□ -0.84
GPNMB-202ENST00000381990 MLXIPQ9HAP2 919 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 RBM12Q9NTZ6 932 aaKnown RBP9.79□□□□□ -0.84
GPNMB-202ENST00000381990 BLOC1S4Q9NUP1 217 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.79□□□□□ -0.84
GPNMB-202ENST00000381990 FEM1BQ9UK73 627 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 SIK3Q9Y2K2 1263 aa9.79□□□□□ -0.84
GPNMB-202ENST00000381990 SMCHD1A6NHR9 2005 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 GOLGA6L10A6NI86 522 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 RBAK-RBAKDNI3L0D1 243 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 CHRM1P11229 460 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 RDXP35241 583 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 EIF4A3P38919 411 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 MDH1P40925 334 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 ASIC1P78348 528 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 PDE4DQ08499 809 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 ZYXQ15942 572 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 TMEM119Q4V9L6 283 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 FOXR2Q6PJQ5 311 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 ARMC9Q7Z3E5 817 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 SAMD7Q7Z3H4 446 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 SLFN12Q8IYM2 578 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 SMCR8Q8TEV9 937 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 ZNF473Q8WTR7 871 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 LARP4BQ92615 738 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 RNPC3Q96LT9 517 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 CCDC43Q96MW1 224 aaKnown RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 GLIS2Q9BZE0 524 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 GOLGA6L7A0A1B0GV03 622 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 TMCO5BA8MYB1 307 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 TBX3O15119 743 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 PLEKP08567 350 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 ACTN3Q08043 901 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 MAN2A1Q16706 1144 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 TBC1D10BQ4KMP7 808 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 TTC19Q6DKK2 380 aaPredicted RBP9.78□□□□□ -0.84
GPNMB-202ENST00000381990 CENPPQ6IPU0 288 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 LRIG3Q6UXM1 1119 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 TAX1BP1Q86VP1 789 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 MYCBPAPQ8TBZ2 947 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 LRRC27Q9C0I9 530 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 NDST4Q9H3R1 872 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 HACL1Q9UJ83 578 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 KDM3AQ9Y4C1 1321 aa9.78□□□□□ -0.84
GPNMB-202ENST00000381990 CES2O00748 559 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 CTNND1O60716 968 aaKnown RBP9.77□□□□□ -0.84
GPNMB-202ENST00000381990 HEXIM1O94992 359 aaKnown RBP9.77□□□□□ -0.84
GPNMB-202ENST00000381990 TAL1P17542 331 aaPredicted RBP9.77□□□□□ -0.84
GPNMB-202ENST00000381990 CIITAP33076 1130 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 ATP1A2P50993 1020 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 ASTE1Q2TB18 679 aaPredicted RBP9.77□□□□□ -0.84
GPNMB-202ENST00000381990 Q4G0T1 1027 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 HYIQ5T013 277 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 KLHDC7AQ5VTJ3 777 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 NLRP14Q86W24 1093 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 NLGN2Q8NFZ4 835 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 RAD54LQ92698 747 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 SYN2Q92777 582 aaPredicted RBP9.77□□□□□ -0.84
GPNMB-202ENST00000381990 CCT8L2Q96SF2 557 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 NUDT12Q9BQG2 462 aa9.77□□□□□ -0.84
GPNMB-202ENST00000381990 SCAF8Q9UPN6 1271 aaKnown RBP9.77□□□□□ -0.84
GPNMB-202ENST00000381990 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.84
GPNMB-202ENST00000381990 GLI1P08151 1106 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 CYP3A4P08684 503 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 HOXA13P31271 388 aaPredicted RBP9.77□□□□□ -0.85
GPNMB-202ENST00000381990 CXCR5P32302 372 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 CDR1P51861 262 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 STK4Q13043 487 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 ITGB3BPQ13352 177 aaPredicted RBP9.77□□□□□ -0.85
GPNMB-202ENST00000381990 NEDD9Q14511 834 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 CCDC40Q4G0X9 1142 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 KCTD16Q68DU8 428 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 CCDC174Q6PII3 467 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 SH2D3CQ8N5H7 860 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 ETNPPLQ8TBG4 499 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 LPAR1Q92633 364 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 P3H4Q92791 437 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 KIAA1683Q9H0B3 1180 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 NT5C3AQ9H0P0 336 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 DEFB129Q9H1M3 183 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 RABEP2Q9H5N1 569 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 EPB41L5Q9HCM4 733 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 DONSONQ9NYP3 566 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 NFU1Q9UMS0 254 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 ASTN2O75129 1339 aaPredicted RBP9.77□□□□□ -0.85
GPNMB-202ENST00000381990 ZNF541Q9H0D2 1346 aa9.77□□□□□ -0.85
GPNMB-202ENST00000381990 PVALEFA0A1B0GWK0 134 aa9.76□□□□□ -0.85
GPNMB-202ENST00000381990 GCOM1H8Y6P7 765 aaPredicted RBP9.76□□□□□ -0.85
GPNMB-202ENST00000381990 MYO1FO00160 1098 aa9.76□□□□□ -0.85
GPNMB-202ENST00000381990 WDR46O15213 610 aaKnown RBP9.76□□□□□ -0.85
GPNMB-202ENST00000381990 RASSF9O75901 435 aa9.76□□□□□ -0.85
GPNMB-202ENST00000381990 POLR2MP0CAP2 368 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms