RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 TRIM60Q495X7 471 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 TMEM119Q4V9L6 283 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 RESP18Q5W5W9 173 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 TRAPPC12Q8WVT3 735 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 CTAGE1Q96RT6 745 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 PLIN2Q99541 437 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 SH2D3AQ9BRG2 576 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 PANK2Q9BZ23 570 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 NT5C3AQ9H0P0 336 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 CYP26B1Q9NR63 512 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 TRMT13Q9NUP7 481 aaKnown RBP17.28■□□□□ 0.36
PDGFB-202ENST00000381551 DBR1Q9UK59 544 aaKnown RBP17.28■□□□□ 0.36
PDGFB-202ENST00000381551 DNM3Q9UQ16 869 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 COL1A2P08123 1366 aa17.28■□□□□ 0.36
PDGFB-202ENST00000381551 MROH7Q68CQ1 1323 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 KDM3AQ9Y4C1 1321 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 KAT6AQ92794 2004 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 A0A1W2PQ27 194 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 A0A1W2PQ64 194 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 A0A1W2PQD8 194 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 E9PMD0 336 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 TREHO43280 583 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 B4GALT4O60513 344 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 PQBP1O60828 265 aaKnown RBP17.27■□□□□ 0.36
PDGFB-202ENST00000381551 KLRC1P26715 233 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 TXLNAP40222 546 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 PTGISQ16647 500 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 MTERF2Q49AM1 385 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 XKR9Q5GH70 373 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 PLA2G4FQ68DD2 849 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 KCNK18Q7Z418 384 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 CEP170P1Q96L14 293 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 CCDC39Q9UFE4 941 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 ATP11BQ9Y2G3 1177 aa17.27■□□□□ 0.36
PDGFB-202ENST00000381551 A0A087X0B3 334 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 DCDC2CA8MYV0 355 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 RARRES1P49788 294 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 RGS19P49795 217 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 FAAP100Q0VG06 881 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 CSPP1Q1MSJ5 1256 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 MTHFD1LQ6UB35 978 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 ZBTB10Q96DT7 871 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 HTATIP2Q9BUP3 242 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 FAM13BQ9NYF5 915 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 PPME1Q9Y570 386 aa17.26■□□□□ 0.35
PDGFB-202ENST00000381551 IGKV6-21A0A0C4DH24 114 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 MAGEB2O15479 319 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 MAFO75444 373 aaPredicted RBP17.25■□□□□ 0.35
PDGFB-202ENST00000381551 C22orf31O95567 290 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 EYA4O95677 639 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 PLCG1P19174 1290 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 RRAGBQ5VZM2 374 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 SERINC5Q86VE9 423 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 RASSF8Q8NHQ8 419 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 BHMT2Q9H2M3 363 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 BLOC1S4Q9NUP1 217 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 TUBE1Q9UJT0 475 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 PCDHA2Q9Y5H9 948 aa17.25■□□□□ 0.35
PDGFB-202ENST00000381551 TRIP12Q14669 1992 aaPredicted RBP17.25■□□□□ 0.35
PDGFB-202ENST00000381551 A0A1B0GVL5 298 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 TLR3O15455 904 aaKnown RBP17.24■□□□□ 0.35
PDGFB-202ENST00000381551 TBC1D8BQ0IIM8 1120 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 PTK7Q13308 1070 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 NAALADL2Q58DX5 795 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 PADI6Q6TGC4 694 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 PDILTQ8N807 584 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 SYT2Q8N9I0 419 aaPredicted RBP17.24■□□□□ 0.35
PDGFB-202ENST00000381551 DHX33Q9H6R0 707 aaKnown RBP17.24■□□□□ 0.35
PDGFB-202ENST00000381551 PDLIM7Q9NR12 457 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 KCNH3Q9ULD8 1083 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 NOD1Q9Y239 953 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 HPSEQ9Y251 543 aa17.24■□□□□ 0.35
PDGFB-202ENST00000381551 SMIM35A0A1B0GVV1 85 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 GOLGA6L4A6NEF3 574 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 DGAT1O75907 488 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 PLA2G4BP0C869 781 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 CYP2C9P11712 490 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 PFKFB1P16118 471 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 RFC5P40937 340 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 MKRN4PQ13434 485 aaPredicted RBP17.23■□□□□ 0.35
PDGFB-202ENST00000381551 E2F4Q16254 413 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 EFCAB12Q6NXP0 572 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 TAF2Q6P1X5 1199 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 RUFY4Q6ZNE9 571 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 EXOC8Q8IYI6 725 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 KIAA0319LQ8IZA0 1049 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 LINC01465Q8N7H1 131 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 RAD54LQ92698 747 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 SUGCTQ9HAC7 445 aa17.23■□□□□ 0.35
PDGFB-202ENST00000381551 ARHGEF35A5YM69 484 aa17.22■□□□□ 0.35
PDGFB-202ENST00000381551 POLR2DO15514 142 aaKnown RBP17.22■□□□□ 0.35
PDGFB-202ENST00000381551 GADD45BO75293 160 aaPredicted RBP17.22■□□□□ 0.35
PDGFB-202ENST00000381551 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms