RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 LTBP3Q9NS15 1303 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 LOXHD1Q8IVV2 1947 aa13.85□□□□□ -0.19
VPS16-202ENST00000380445 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 ENC1O14682 589 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 ERLIN1O75477 346 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 ATP1A1P05023 1023 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 P4HBP07237 508 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 EXOC3L4Q17RC7 722 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 HS2ST1Q7LGA3 356 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 MICALL2Q8IY33 904 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 RNF10Q8N5U6 811 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 MKNK1Q9BUB5 465 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 AS3MTQ9HBK9 375 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 TBC1D22BQ9NU19 505 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 TFR2Q9UP52 801 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 SFI1A8K8P3 1242 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 AKAP3O75969 853 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 PSMC2P35998 433 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 IQCEQ6IPM2 695 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 ZNF720Q7Z2F6 126 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 HNRNPLLQ8WVV9 542 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 RAVER2Q9HCJ3 691 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 JADE2Q9NQC1 790 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 CNOT7Q9UIV1 285 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 HACL1Q9UJ83 578 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 FBXL5Q9UKA1 691 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 UBIAD1Q9Y5Z9 338 aa13.84□□□□□ -0.19
VPS16-202ENST00000380445 BZW2Q9Y6E2 419 aaKnown RBP13.84□□□□□ -0.19
VPS16-202ENST00000380445 GTPBP10A4D1E9 387 aaKnown RBP13.83□□□□□ -0.19
VPS16-202ENST00000380445 VCAM1P19320 739 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 GMPSP49915 693 aaPredicted RBP13.83□□□□□ -0.19
VPS16-202ENST00000380445 RAPGEF1Q13905 1077 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 TKFCQ3LXA3 575 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 GBP6Q6ZN66 633 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 GANQ9H2C0 597 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 COL20A1Q9P218 1284 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 RAB21Q9UL25 225 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 DUSP10Q9Y6W6 482 aa13.83□□□□□ -0.19
VPS16-202ENST00000380445 TGFB1I1O43294 461 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 PRLRP16471 622 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 KLHL30Q0D2K2 578 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 MTMR1Q13613 665 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 R3HDM1Q15032 1099 aaKnown RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 ASIC2Q16515 512 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 DCAF17Q5H9S7 520 aaPredicted RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 ODR4Q5SWX8 454 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 TCERG1LQ5VWI1 586 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 SYTL5Q8TDW5 730 aaPredicted RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 SPAG5Q96R06 1193 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 GBP3Q9H0R5 595 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 ANKZF1Q9H8Y5 726 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 PPP1R1BQ9UD71 204 aaPredicted RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 SCAF8Q9UPN6 1271 aaKnown RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 EGFRP00533 1210 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 NMT1P30419 496 aaKnown RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 MTMR2Q13614 643 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 ALCAMQ13740 583 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 BANK1Q8NDB2 785 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 RPAP3Q9H6T3 665 aaPredicted RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 AGO4Q9HCK5 861 aaKnown RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 LARSQ9P2J5 1176 aaKnown RBP13.83□□□□□ -0.2
VPS16-202ENST00000380445 BCS1LQ9Y276 419 aa13.83□□□□□ -0.2
VPS16-202ENST00000380445 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 RBBP6Q7Z6E9 1792 aaKnown RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 FZD9O00144 591 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 ZBTB39O15060 712 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 CLIC2O15247 247 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 MCM3P25205 808 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 GFPT1Q06210 699 aaPredicted RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 SLC18A3Q16572 532 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 C10orf76Q5T2E6 689 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 NOX5Q96PH1 765 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 WRAP73Q9P2S5 460 aaPredicted RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 HDAC6Q9UBN7 1215 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 TCEAL9Q9UHQ7 104 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 DBR1Q9UK59 544 aaKnown RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 FRMD4BQ9Y2L6 1034 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 SAMM50Q9Y512 469 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 CD2APQ9Y5K6 639 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 DDX39AO00148 427 aaKnown RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 TLR2O60603 784 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 MAPTP10636 758 aaKnown RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 UCHL3P15374 230 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 RPS6P62753 249 aaKnown RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 KCNA1Q09470 495 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 TBC1D10BQ4KMP7 808 aaPredicted RBP13.82□□□□□ -0.2
VPS16-202ENST00000380445 KLHDC7AQ5VTJ3 777 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 XRRA1Q6P2D8 792 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 FAM186BQ8IYM0 893 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 SCYL3Q8IZE3 742 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 SLC35C1Q96A29 364 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 POLD4Q9HCU8 107 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 HOMER2Q9NSB8 354 aa13.82□□□□□ -0.2
VPS16-202ENST00000380445 DHX15O43143 795 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms