RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 EIF4A3P38919 411 aaKnown RBP25.38■■□□□ 1.65
VPS16-201ENST00000380443 JAK3P52333 1124 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 CHMP4BP1P59074 171 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 MRPS9P82933 396 aaKnown RBP25.38■■□□□ 1.65
VPS16-201ENST00000380443 PGM5Q15124 567 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 NOL9Q5SY16 702 aaKnown RBP25.38■■□□□ 1.65
VPS16-201ENST00000380443 FAM178BQ8IXR5 827 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 OGFRQ9NZT2 677 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 FBXL5Q9UKA1 691 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 ADAMTS5Q9UNA0 930 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 PCDHA13Q9Y5I0 950 aa25.38■■□□□ 1.65
VPS16-201ENST00000380443 ABL1P00519 1130 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 SFNP31947 248 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 AMPD2Q01433 879 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 ASTE1Q2TB18 679 aaPredicted RBP25.37■■□□□ 1.65
VPS16-201ENST00000380443 ANGEL2Q5VTE6 544 aaKnown RBP25.37■■□□□ 1.65
VPS16-201ENST00000380443 HS2ST1Q7LGA3 356 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 TAAR1Q96RJ0 339 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 WRNIP1Q96S55 665 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 IFIH1Q9BYX4 1025 aaKnown RBP25.37■■□□□ 1.65
VPS16-201ENST00000380443 PXMP2Q9NR77 195 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 AIPL1Q9NZN9 384 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 TCEAL9Q9UHQ7 104 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 RBAK-RBAKDNI3L0D1 243 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 ATP2A1O14983 1001 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 PJA2O43164 708 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 DSG3P32926 999 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 PSMC2P35998 433 aaKnown RBP25.37■■□□□ 1.65
VPS16-201ENST00000380443 QARSP47897 775 aaKnown RBP25.37■■□□□ 1.65
VPS16-201ENST00000380443 SUPT20HL1Q3ZLR7 823 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 PAPD7Q5XG87 772 aaKnown RBP25.37■■□□□ 1.65
VPS16-201ENST00000380443 IL31RAQ8NI17 732 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 TMEM174Q8WUU8 243 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 RMDN3Q96TC7 470 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 GPRC5DQ9NZD1 345 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 DAAM1Q9Y4D1 1078 aa25.37■■□□□ 1.65
VPS16-201ENST00000380443 TGFB1I1O43294 461 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 TUBBP07437 444 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 KRT76Q01546 638 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 SLC17A8Q8NDX2 589 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 TRIM58Q8NG06 486 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 SECISBP2LQ93073 1101 aaKnown RBP25.36■■□□□ 1.65
VPS16-201ENST00000380443 FIZ1Q96SL8 496 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 PDCD2LQ9BRP1 358 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 GANQ9H2C0 597 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 WRAP73Q9P2S5 460 aaPredicted RBP25.36■■□□□ 1.65
VPS16-201ENST00000380443 DDX41Q9UJV9 622 aaKnown RBP25.36■■□□□ 1.65
VPS16-201ENST00000380443 MYPNQ86TC9 1320 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 PARP14Q460N5 1801 aa25.36■■□□□ 1.65
VPS16-201ENST00000380443 AKAP3O75969 853 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 POLR2FP61218 127 aaKnown RBP25.35■■□□□ 1.65
VPS16-201ENST00000380443 COG2Q14746 738 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 ODR4Q5SWX8 454 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 PADI6Q6TGC4 694 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 TRAPPC11Q7Z392 1133 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 SLC9A9Q8IVB4 645 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 CCDC155Q8N6L0 562 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 STRA6Q9BX79 667 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 TAF1DQ9H5J8 278 aaPredicted RBP25.35■■□□□ 1.65
VPS16-201ENST00000380443 LARSQ9P2J5 1176 aaKnown RBP25.35■■□□□ 1.65
VPS16-201ENST00000380443 BZW2Q9Y6E2 419 aaKnown RBP25.35■■□□□ 1.65
VPS16-201ENST00000380443 ATP8B1O43520 1251 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 TACC1O75410 805 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 ANXA13P27216 316 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 CCND2P30279 289 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 EPHX2P34913 555 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 ITGB3BPQ13352 177 aaPredicted RBP25.35■■□□□ 1.65
VPS16-201ENST00000380443 ARHGEF16Q5VV41 709 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 HGSNATQ68CP4 663 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 GBP6Q6ZN66 633 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 PNMA8AQ86V59 439 aaPredicted RBP25.35■■□□□ 1.65
VPS16-201ENST00000380443 C4orf19Q8IY42 314 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 BANK1Q8NDB2 785 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 REPS2Q8NFH8 660 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 GPRASP2Q96D09 838 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 ATG4CQ96DT6 458 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 KLRG1Q96E93 195 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 RPGRIP1Q96KN7 1286 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 LACRTQ9GZZ8 138 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 GBP3Q9H0R5 595 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 HOMER2Q9NSB8 354 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 RNF146Q9NTX7 359 aa25.35■■□□□ 1.65
VPS16-201ENST00000380443 CTAGE15A4D2H0 777 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 ZNF263O14978 683 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 CTAGE8P0CG41 777 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 NMT1P30419 496 aaKnown RBP25.34■■□□□ 1.65
VPS16-201ENST00000380443 SNRPFP62306 86 aaKnown RBP25.34■■□□□ 1.65
VPS16-201ENST00000380443 EXOC3L4Q17RC7 722 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 TEX35Q5T0J7 233 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 SLC30A10Q6XR72 485 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 CTAGE6Q86UF2 777 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 NLRX1Q86UT6 975 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 CTAGE4Q8IX94 777 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 BORCS6Q96GS4 357 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 TMEM206Q9H813 350 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 DMAC2Q9NW81 257 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 ZHX2Q9Y6X8 837 aa25.34■■□□□ 1.65
VPS16-201ENST00000380443 SFI1A8K8P3 1242 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 WDR64B1ANS9 1081 aa25.33■■□□□ 1.65
VPS16-201ENST00000380443 PLEKP08567 350 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms