RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 CABP7Q86V35 215 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 CCDC25Q86WR0 208 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 FAM133AQ8N9E0 248 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 HPS3Q969F9 1004 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 NAP1L3Q99457 506 aaPredicted RBP7.89□□□□□ -1.15
TRIM6-202ENST00000380097 EDEM3Q9BZQ6 932 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 COQ9O75208 318 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 CALM1P0DP23 149 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 CALM2P0DP24 149 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 CALM3P0DP25 149 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 STX2P32856 288 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 PEX5P50542 639 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 DR1Q01658 176 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 ADAM9Q13443 819 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 METTL13Q8N6R0 699 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 GDAP1Q8TB36 358 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 MIPOL1Q8TD10 442 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 STK32AQ8WU08 396 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 KIFAP3Q92845 792 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 BICD1Q96G01 975 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 CDK5RAP3Q96JB5 506 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 EPB41L4AQ9HCS5 686 aaPredicted RBP7.89□□□□□ -1.15
TRIM6-202ENST00000380097 KCNMB3Q9NPA1 279 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 LMCD1Q9NZU5 365 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 CEP72Q9P209 647 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 SRP68Q9UHB9 627 aaKnown RBP7.89□□□□□ -1.15
TRIM6-202ENST00000380097 NIP7Q9Y221 180 aaKnown RBP eCLIP7.89□□□□□ -1.15
TRIM6-202ENST00000380097 LRRC42Q9Y546 428 aa7.89□□□□□ -1.15
TRIM6-202ENST00000380097 A0A1B0GVG6 124 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 E7ENQ6 273 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 CES2O00748 559 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 FGGP02679 453 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 PYGBP11216 843 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 PLCG1P19174 1290 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SP100P23497 879 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 CRKLP46109 303 aaKnown RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 CCNG1P51959 295 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ITPK1Q13572 414 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 RCN2Q14257 317 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 VPS36Q86VN1 386 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SYCP3Q8IZU3 236 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 MIGA1Q8NAN2 632 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 PPFIBP2Q8ND30 876 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 BAP1Q92560 729 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 CALML4Q96GE6 196 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 TRIM9Q9C026 710 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 MTFR1LQ9H019 292 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 TAOK3Q9H2K8 898 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 KBTBD4Q9NVX7 518 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 TMEM59LQ9UK28 342 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 DBR1Q9UK59 544 aaKnown RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SNX24Q9Y343 169 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SLIT3O75094 1523 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 O00370 1275 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 TRAF5O00463 557 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 PCCAP05165 728 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 UQCRFS1P1P0C7P4 283 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SCG2P13521 617 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 GNAT2P19087 354 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 RASSF2P50749 326 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ASTE1Q2TB18 679 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 NAALADL2Q58DX5 795 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ZC3H18Q86VM9 953 aaKnown RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SYCE1Q8N0S2 351 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 FITM2Q8N6M3 262 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 GJD4Q96KN9 370 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 CUEDC2Q9H467 287 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 STOML1Q9UBI4 398 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 NKX1-2Q9UD57 310 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 CCNL1Q9UK58 526 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ZMYND8Q9ULU4 1186 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SPATA31A5Q5VU36 1347 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SPATA31A7Q8IWB4 1347 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 MYH10P35580 1976 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ROBO1Q9Y6N7 1651 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 BCL9LQ86UU0 1499 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 NKRFO15226 690 aaKnown RBP eCLIP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 NVLO15381 856 aaKnown RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 LGR5O75473 907 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 WFS1O76024 890 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 GSTA2P09210 222 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 TPP2P29144 1249 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SERPINB4P48594 390 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 TUBP50607 506 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 SGSM1Q2NKQ1 1148 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 DYMQ7RTS9 669 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ANKRD23Q86SG2 305 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 COL23A1Q86Y22 540 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 BLIDQ8IZY5 108 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 RASGRP4Q8TDF6 673 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ZSCAN10Q96SZ4 725 aaPredicted RBP7.88□□□□□ -1.15
TRIM6-202ENST00000380097 LRRC4CQ9HCJ2 640 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 CYP39A1Q9NYL5 469 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 NKIRAS1Q9NYS0 192 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 ZNF232Q9UNY5 417 aa7.88□□□□□ -1.15
TRIM6-202ENST00000380097 GSG1L2A8MUP6 293 aa7.87□□□□□ -1.15
TRIM6-202ENST00000380097 PFDN1O60925 122 aa7.87□□□□□ -1.15
TRIM6-202ENST00000380097 ATP5HO75947 161 aa7.87□□□□□ -1.15
TRIM6-202ENST00000380097 ATP5DP30049 168 aa7.87□□□□□ -1.15
TRIM6-202ENST00000380097 PTDSS1P48651 473 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms