RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 MDM2Q00987 491 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 FKBP4Q02790 459 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 MECOMQ03112 1051 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 DHX9Q08211 1270 aaKnown RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 BNIP1Q12981 228 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 WASHC4Q2M389 1173 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ANO1Q5XXA6 986 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SCUBE1Q8IWY4 988 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 LRRC43Q8N309 656 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 TRIML1Q8N9V2 468 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 STK32AQ8WU08 396 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 OSBP2Q969R2 916 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF594Q96JF6 807 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SETDB2Q96T68 719 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 BRIP1Q9BX63 1249 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 EPB41L5Q9HCM4 733 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SUCLA2Q9P2R7 463 aaPredicted RBP8.12□□□□□ -1.11
CDKL5-201ENST00000379989 INTUQ9ULD6 942 aa8.12□□□□□ -1.11
CDKL5-201ENST00000379989 SMARCA1P28370 1054 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 OLFML2BQ68BL8 750 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 USP33Q8TEY7 942 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 UTP4Q969X6 686 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 ELAC2Q9BQ52 826 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 RBM12Q9NTZ6 932 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 NOVA2Q9UNW9 492 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 DLEC1Q9Y238 1755 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 LRRC37AA6NMS7 1700 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 SIGLEC16A6NMB1 481 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 BOLA2-SMG1P6H3BVE0 249 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 TJP3O95049 919 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 CALM1P0DP23 149 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 CALM2P0DP24 149 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 CALM3P0DP25 149 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 GM2AP17900 193 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 KRT9P35527 623 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 MAGOHP61326 146 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 ITGA7Q13683 1181 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 RCN2Q14257 317 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 TRADDQ15628 312 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 LRRC34Q8IZ02 419 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 MAGOHBQ96A72 148 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF333Q96JL9 665 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 STRBPQ96SI9 672 aaKnown RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 NUP88Q99567 741 aaPredicted RBP8.11□□□□□ -1.11
CDKL5-201ENST00000379989 PFDN4Q9NQP4 134 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 CYP39A1Q9NYL5 469 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 FRMD4BQ9Y2L6 1034 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 LRCH1Q9Y2L9 728 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 TIMM22Q9Y584 194 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 HEY1Q9Y5J3 304 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 DUSP10Q9Y6W6 482 aa8.11□□□□□ -1.11
CDKL5-201ENST00000379989 FAM237AA0A1B0GTK4 181 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 KRT86O43790 486 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 HEXIM1O94992 359 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MMEP08473 750 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PYGMP11217 842 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 FDPSP14324 419 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 HSD17B3P37058 310 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 GSTO1P78417 241 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 UAP1Q16222 522 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 AGBL2Q5U5Z8 902 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PACS1Q6VY07 963 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 ZNF662Q6ZS27 426 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 FAM196AQ6ZSG2 479 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 ARHGAP27Q6ZUM4 889 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 RNF10Q8N5U6 811 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 STKLD1Q8NE28 680 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 CASKIN2Q8WXE0 1202 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 GATA6Q92908 595 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PBKQ96KB5 322 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 SNX27Q96L92 541 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MAP3K14Q99558 947 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 CENPOQ9BU64 300 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MTFR1LQ9H019 292 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 KIAA1522Q9P206 1035 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PDP2Q9P2J9 529 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 HESX1Q9UBX0 185 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 ANGEL1Q9UNK9 670 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 LAMB1P07942 1786 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 FGAP02671 866 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 ALDH2P05091 517 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 TROVE2P10155 538 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 NAT2P11245 290 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 NFKBIAP25963 317 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MTTPP55157 894 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 NSUN2Q08J23 767 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MORC3Q14149 939 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 SLC39A14Q15043 492 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 MUM1Q2TAK8 710 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 PUS10Q3MIT2 529 aaKnown RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 DAB2IPQ5VWQ8 1189 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 SLC2A7Q6PXP3 512 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 RBBP8NLQ8NC74 664 aaPredicted RBP8.1□□□□□ -1.11
CDKL5-201ENST00000379989 SUPT20HQ8NEM7 779 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 CENPTQ96BT3 561 aa8.1□□□□□ -1.11
CDKL5-201ENST00000379989 TUBA8Q9NY65 449 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms