RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 MED1Q15648 1581 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-202ENST00000379826 EPHB6O15197 1021 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 GDF11O95390 407 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 SLC9A1P19634 815 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
SMAD9-202ENST00000379826 AARSP49588 968 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMAD9-202ENST00000379826 NAB2Q15742 525 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 SLFN13Q68D06 897 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 ZNF507Q8TCN5 953 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 MTMR8Q96EF0 704 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 THOC1Q96FV9 657 aaKnown RBP12.34□□□□□ -0.43
SMAD9-202ENST00000379826 MTFR1LQ9H019 292 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 UBE2TQ9NPD8 197 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-202ENST00000379826 ATRNO75882 1429 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 ATP5DP30049 168 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 CCDC13Q8IYE1 715 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 BHMT2Q9H2M3 363 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 METTL14Q9HCE5 456 aaKnown RBP12.34□□□□□ -0.43
SMAD9-202ENST00000379826 GAS7O60861 476 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 ADCY8P40145 1251 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 ITPK1Q13572 414 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 CCDC38Q502W7 563 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 PARP9Q8IXQ6 854 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 SLC10A4Q96EP9 437 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 IFT74Q96LB3 600 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 MTRQ99707 1265 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 IL17RBQ9NRM6 502 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 PLAGL2Q9UPG8 496 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 ARFGEF2Q9Y6D5 1785 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 CDC37Q16543 378 aaPredicted RBP12.34□□□□□ -0.43
SMAD9-202ENST00000379826 C10orf76Q5T2E6 689 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 GADL1Q6ZQY3 521 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 ANO3Q9BYT9 981 aa12.34□□□□□ -0.43
SMAD9-202ENST00000379826 NR3C1P04150 777 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 HOXD10P28358 340 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 LRRC14Q15048 493 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 INTS5Q6P9B9 1019 aaKnown RBP12.33□□□□□ -0.44
SMAD9-202ENST00000379826 VSIG1Q86XK7 387 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-202ENST00000379826 ACTR5Q9H9F9 607 aaPredicted RBP12.33□□□□□ -0.44
SMAD9-202ENST00000379826 PARP2Q9UGN5 583 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 SORBS3O60504 671 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 ACSL3O95573 720 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 HSD17B3P37058 310 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 PTK2Q05397 1052 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 ODR4Q5SWX8 454 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF365Q70YC5 407 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 GLYCTKQ8IVS8 523 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 PPM1KQ8N3J5 372 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 USP38Q8NB14 1042 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 MDM1Q8TC05 714 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 NEK9Q8TD19 979 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 FBF1Q8TES7 1133 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 CYFIP2Q96F07 1278 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 DNAJC12Q9UKB3 198 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 KIF1AQ12756 1690 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 C21orf2O43822 256 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 RASA1P20936 1047 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 SLC8A1P32418 973 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 FBXO11Q86XK2 927 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 RUBCNQ92622 972 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 CEP63Q96MT8 703 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 HOMER2Q9NSB8 354 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 EIF4E1BA6NMX2 242 aaKnown RBP12.33□□□□□ -0.44
SMAD9-202ENST00000379826 THAP12O43422 761 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 FGFR4P22455 802 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 SEPT2Q15019 361 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 KLHDC7AQ5VTJ3 777 aa12.33□□□□□ -0.44
SMAD9-202ENST00000379826 PMS2P54278 862 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 CACNB3P54284 484 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 SBK1Q52WX2 424 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 SLC16A10Q8TF71 515 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 GLT8D2Q9H1C3 349 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 LEMD3Q9Y2U8 911 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 NEDD9Q14511 834 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 CERKLQ49MI3 558 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-202ENST00000379826 DCAF15Q66K64 600 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 GLIS3Q8NEA6 775 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 PRMT1Q99873 361 aaKnown RBP12.32□□□□□ -0.44
SMAD9-202ENST00000379826 MYBP10242 640 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 GUCY2CP25092 1073 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF131P52739 623 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 KDM7AQ6ZMT4 941 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 KIFAP3Q92845 792 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 A0A087X0T9 212 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 KLRC4O43908 158 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 FAM228BP0C875 321 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 AKR1B1P15121 316 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 MEA1Q16626 185 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 NAALADL2Q58DX5 795 aa12.32□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF746Q6NUN9 644 aaPredicted RBP12.32□□□□□ -0.44
SMAD9-202ENST00000379826 APTXQ7Z2E3 356 aaKnown RBP12.32□□□□□ -0.44
SMAD9-202ENST00000379826 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms